Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1872 ATGGGTATGGCTTCTGCGTCAAGTGACGACATCCCTTTGTTACTCACCCAATCCCAATCTCTTGTAAGAACAGGAACGGTGTGGAGCGCAGTGGCACACATAGTGACAGGGGTGATAGGATCGGGAGTGTTGTCTCTTCCATGGAGCATTGCACAGCTTGGATGGCTTGCAGGCCCTTTCTCCGTTCTCCTCATTGCTTCAACCACTCTCTTCTCTTCGTTCCTTCTATGCAACACTTATCGTCATCCCAATCCAGAATATGGTCCTCACAGGAGTGCCTCTTACCTTGATGTTGTTCAATTGCATATGGGAGTGGGGAATGGACGACTCAGTGGCCTTCTTGTTAATATAAGTTTGTATGGTTTTGGAATTGCCTTTGTCATTACTACAGCTATTAGCTTGAGAGCTATCCAAAATTCAATATGCTTCCACCAAAAAGGGGATGAAGCAGCATGTGAAATTGTGGATGCTTATTATATGTTGCTTTTTGGGGCTATTCAAATTGTTCTCTCACAGATACCCAACTTCCATAACATCAAATGGTTGTCAGTTGTTGCTGCAATTATGTCTTTTACTTATTCTTTCATAGGAATGGGGCTTTCCATTGCAAAAACCATAGAAAATGGACATGTGGAGGGCAGCATTGAGGGAATCAGTACCTCTAGTGGAACTGAAAAGCTATGGCTTGTTTCTCAAGCACTTGGTGACATATCATTTTCGTATCCATTCTCAACAATTCTTATGGAAATACAGGATACTTTGAAATCGCCTCCACCAGAAAACCAAACCATGAAGAAGGCCTCGGTAATATCAGTCGCTGTCACAACATTCGTGTACCTCGCTTGTGGAGGTGCTGGATATGCTGCCTTTGGTGATAAAACACCAGGAAACCTTTTAACAGGGTTTGGATCCTCCAAATCTTACTGGCTTGTAAACTTTGCTAACGCTTGCATAGTGATTCATCTAGTTGGTTCATATCAGGTGTATAGTCAGCCACTTTTTGCCACTGTTGAGAATTGGTTCCGTTTTAAATTCCCAGACAGTGAATTTGTGAATCACACATATATGTGGAAACTCCCGTTGCTGCCAGCTTTTGAACTAAACGTTCTCAGCCTGTCTTTCCGAACTGCTTATGTTGTATCAACAACTGTGATTGCAATGATCTTTCCATACTTCAATCAGATTTTGGGAGTTTTGGGTAGCCTTATTTTTTGGCCGTTAACTATACATTTTCCAGTGGAAATATACTTGAATCAGTCAAGTACTGTAGCTTGGACGACTAAGTGGGTCCTGCTTCGGACTTTCAGCATTTTTGGTTTTGTGTTTGGACTGTTCACTCTCACTGGATGCATTAAAGGAATAGTAACTGAAAAAATAGGCTGA 1383 0.4208 MGMASASSDDIPLLLTQSQSLVRTGTVWSAVAHIVTGVIGSGVLSLPWSIAQLGWLAGPFSVLLIASTTLFSSFLLCNTYRHPNPEYGPHRSASYLDVVQLHMGVGNGRLSGLLVNISLYGFGIAFVITTAISLRAIQNSICFHQKGDEAACEIVDAYYMLLFGAIQIVLSQIPNFHNIKWLSVVAAIMSFTYSFIGMGLSIAKTIENGHVEGSIEGISTSSGTEKLWLVSQALGDISFSYPFSTILMEIQDTLKSPPPENQTMKKASVISVAVTTFVYLACGGAGYAAFGDKTPGNLLTGFGSSKSYWLVNFANACIVIHLVGSYQVYSQPLFATVENWFRFKFPDSEFVNHTYMWKLPLLPAFELNVLSLSFRTAYVVSTTVIAMIFPYFNQILGVLGSLIFWPLTIHFPVEIYLNQSSTVAWTTKWVLLRTFSIFGFVFGLFTLTGCIKGIVTEKIG* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1872 460 PANTHER OS05G0424000 PROTEIN-RELATED 3 459 - -
Apr9g1872 460 Pfam Transmembrane amino acid transporter protein 23 454 IPR013057 -
Apr9g1872 460 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1872 Apr-Chr9 27402818 27405575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1872 23 437 Organic Solute Cotransporters AT1G77380 51.559 6.38e-153 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1872 K24917 - gmx:100788056 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1872 9 27402818 27405575 Apr9g1872 9 27402818 27405575 ECH
Apr10g1737 10 30295882 30301019 Apr9g1872 9 27402818 27405575 PCT