Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1869 ATGACTGTGGGAGCAGGGATATCTGTTGCTGATGGCAACTTGATGGTGTTGGGGAAGAAGGTGTTGTCACATGTTCATCACAACCTCCTCGTTACTCCTGCATCTGGGGGTGCTTTGCTCAATGGGGCATTCATTGGTGTTCAATCCCATCAAAAGGGTAGTCGCGGAGTCTTCCCTATCGGCACGCTTCAGGGCTTGCGATTTATGTGTGTTTTCCGCTTCAAGATGTGGTGGATGACACAGAGAATGGGCACTTGTGGACATGAAGTTCCAATTGAGACGCAGTTCTTGCTTGTTGAAGCACACGATGGCTCTGATATTGATGGAGGGGTCGGCAATGGAGAAGACCATGCTGCTGCTACCTATGTAGTTTTCTTACCGCTTCTGGAAGGGGATTTCAGAGCAGTCCTTCAGGGGAATGATCAGAACGAGATTGAGATATGTGTAGAAAGTGGTTGTCCTGCTGTTGAGGAATTTGATGGCACTCATTTGGTATTTATTGGAGCTGGATCTGACCCTTATGAAGTCATAACAAATTCTGTCAAGACTGTTGAGAAACACTTACAGACATTTGCTCATCGTGAGAGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGGTGGTGTACATGGGATGCTTTCTATACTAATGTCACTTCAGAGAATGTGAAGCAAGGATTGGAAAGCCTTGAGAAAGGTGGAATTCCTGCTAAGTTTGTTATAATTGATGATGGATGGCAATCTGTTGGCTTGGACCCCAATGCTGTTGAATGGAAATCTGATAGTGCAGCCAACTTTGCAAATCGCTTAACACACATCAAAGAGAATCACAAGTTCCAGAAAGATGGCAAGGAAGGTGAACGTGTAGAGGACCCTGCTCTTGGACTACATCATATTACCAGTGAAATCAAACAAGAGCATGATATAAAGTACGTATATGTGTGGCATGCAATAACAGGATATTGGGGTGGTGTTAAACCTGGGGTTACTGGCATGGAGCACTATGAGTCAAAGATGGCCTTCCCTGTCTCATCTCCTGGAGTTGAGTCAAATCAACCAGATGAAGCTTTGACAACTATTGCCATCAATGGGCTTGGCCTTGTGAATCCTGAGAAAGTTTTTCACTTCTATGATGAACTCCACTCATATCTGGCATCTGCTGGTATTGATGGTGTCAAAGTTGATGTTCAGAATATCCTTGAAACTCTTGGGGCAGGACATGGTGGGAGGGTGAAACTTGCAAGGAAGTACCACCAAGCATTGGAGGCATCAATCTCTAGGAACTTCCCTGACAATGGAATCATATGTTGCATGAGTCACAACACAGATGGATTGTACAGTGCAAAGCGTTCAGCTGTTATTAGAGCATCAGATGATTTCTGGCCTAGAGACCCTGCATCCCACACGATTCACATTGCATCAGTTGCTTACAATACTATATTCCTTGGAGAATTTATGCAGCCAGATTGGGATATGTTTCATAGCTTACATCCAATGGCTGAATATCATGGTGCTGCACGAGCAGTAGGGGGATGTCCTATTTATGTCAGTGACAAGCCTGGACATCATGACTTCAATCTTTTGAAGAAGCTTGCACTACCTGATGGTTCTATATTAAGGGCTAAACTTCCAGGAAGACCAACAAAGGATTGTTTGTTTACTGACCCTGCTAGAGATGGAAAAAGTCTCCTGAAGATTTGGAACATGAATGATTTTTCTGGAGTTGTTGGGGTATTCAACTGCCAAGGAGCTGGGTGGTGCAATGTTGGCAAGAAGAACCTTATCCACGATGAGAATCCAGGCACTGTCACAGGTGTCATTAGAGCTAAAGATGTTGACTATTTATCCAGGGTAGCAGATGATAAATGGGAAGGAGACACCATTATATTTTTTCATGTTGGAGGAGGAGTGGTTTACCTTCCAAAGGATGCATCTATTCCAGTTACCTTGAAATCACGAGAATATGAAGTTTTCACAGTTGTTCCCGTGAAGGAGTTGGACAATGAAATAAAATTTGCTCCTATTGGTTTAATGAAGATGTTCAATTCAGGAGGGGCTGTAAAAGAGTTGAATTTGGGGTCTAATGGAAGTACAAATGTAGCCATGAAAGTCCGTGGATGTGGCCAATTTGGTGCTTATTCATCATCTCGGCCTAGGTTGATAACAGTTGATTCAGAAGAGGTGGAATTCAATTATGAGGAAGAATATGGATTGTTGACTATTGACTTGAGAGTGCCTGAGAAAGAGTTATACCAATGGAGCATTTCTATTGATTTTTGA 2280 0.4311 MTVGAGISVADGNLMVLGKKVLSHVHHNLLVTPASGGALLNGAFIGVQSHQKGSRGVFPIGTLQGLRFMCVFRFKMWWMTQRMGTCGHEVPIETQFLLVEAHDGSDIDGGVGNGEDHAAATYVVFLPLLEGDFRAVLQGNDQNEIEICVESGCPAVEEFDGTHLVFIGAGSDPYEVITNSVKTVEKHLQTFAHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKQGLESLEKGGIPAKFVIIDDGWQSVGLDPNAVEWKSDSAANFANRLTHIKENHKFQKDGKEGERVEDPALGLHHITSEIKQEHDIKYVYVWHAITGYWGGVKPGVTGMEHYESKMAFPVSSPGVESNQPDEALTTIAINGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCPIYVSDKPGHHDFNLLKKLALPDGSILRAKLPGRPTKDCLFTDPARDGKSLLKIWNMNDFSGVVGVFNCQGAGWCNVGKKNLIHDENPGTVTGVIRAKDVDYLSRVADDKWEGDTIIFFHVGGGVVYLPKDASIPVTLKSREYEVFTVVPVKELDNEIKFAPIGLMKMFNSGGAVKELNLGSNGSTNVAMKVRGCGQFGAYSSSRPRLITVDSEEVEFNYEEEYGLLTIDLRVPEKELYQWSISIDF* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1869 759 Gene3D Aldolase class I 199 529 IPR013785 -
Apr9g1869 759 SUPERFAMILY (Trans)glycosidases 200 531 IPR017853 -
Apr9g1869 759 PANTHER - 1 758 IPR008811 -
Apr9g1869 759 Pfam Raffinose synthase or seed imbibition protein Sip1 7 742 IPR008811 -
Apr9g1869 759 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 1-RELATED 1 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1869 Apr-Chr9 27387331 27393588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1869 1 757 Glycoside Hydrolase AT1G55740 72.332 0.0 1119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1869 K06617 - gmx:100785506 1437.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1869 9 27387331 27393588 Apr9g1869 9 27387331 27393588 ECH