Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1852 ATGAGCGGCGGTGGTGGGTCTTCGAATTCTAGGGTTCCGATCCCAAACAATGTCCGCAAAATCATCCAAGACATCAGAGAGATCACCGGAAAACAGCACACCGACGACGAAATCTACGCCGTCCTCAAGGAATGCTCTATGGATCCCAATGAGACCGCTCAGAAGCTTCTCTATTTAGATACTTTTCATGAAGTGAGAAGGAGACGTGACCGAAAGAAGGAGGGATTGAGCGGCAGGGCTTCGGAGGAGTATAGGTTAAAGCAAGGTGGACAAGGGAGGGGGGGAAGGGGTGCTTCAGGAGGAAATTCCTCCAACTTTCCTGATGGTGGCGGTGGGAGGAACCTTGCTATTCGAAGGGAAAATGGAGTCAATCACAATGCAGAGAGAAATCATGCTCCCTCTACCCAGCCAGTTTTGCAGAAAACTAAGACTAGTACAACATCTCAAACCACAAGAGTTTCAGCTGTTGCACTGCATGCTGTGGCAAATCAATCCAATGGGAAGTCAGGTCATATTTCTGCTGGCCAATCTCCCATAGGTGGTGTACCTAAAAGTAGTTGTGATGCTAATGACACTGGCTATCAAGAAAATGCTCAACCTCAAGCTGCTGTTGTTGCAGCAGCCTCTTCCACTACTCCAACCTTTGGCTCAGTTACCAGTACTGACCAGGGAAAATCTCTGTCAAGGTCTGATCAACTACAAACTTCTGTATCTGGTGTCTATTCTTCTTTGGATCCTGTAGTAGCATCATCTGTCTCCCGGAATCCTGGTAGTAGTGGTGCTATTAGTCGGGAAGTTGGGAGTAACTGGATATCTTCTGGACCAAAAGATGTTCAAGCAAATAAAGTTGTTCCTCATGAAGTTAATGATGTATCAGCACCCAAGAATGAAAAATCTGAGTCTATGAATTCAACAAGCAAAATAAATGCCCTACAGAAGTCAAATGAAGTTGAAAATAATCAGTTTTTGGAACCCTCTCAAGTTTCATCCTCTTCATCACTAAATGGTTCGTTGAGGCCATCTTCTAGTTCTAGTAGCCAGCCACCCCAAGCTAATGTCACAGAGGTTTCAACATCAGAAGCTTGTGTGCAATCTTCAGCAGAGATGAGGCAACATGTTACTTTTCCAAACCATTTCCAAGTACCCAAGGCTTTAAAAAGTGGTCTGACGTTTGGAAGCTTTGATACTTTTGGCCCAAGTGAAAAATCTAGCAGTGGAACTGGTGGTGACAATAGCCCTTCTGCTCTTGCTGCTTCACTAGGGAATGATGAAGCTGCTGCTTCTAGCAACCAAAGTGTGTCATTGACTGAACAAGGAGATCATCTTGATTATCCACATTCTTCATCTTATTTGATTGAAAAGACACCAGCAACAGAAGGCAATTCTATAACTAGTACTGACACAAAGGTTGATCAACCAAAGAAGGAAAATTTGTTGGCTCCTGAGGCCCATCCAATTCCAACTGTTCAAACTGCTCAGAACTATGGTTTGAATTTCATGTCCACAATGTTAGGGACCCAGCAAATTCAATTTGAGGGAACTGAGCCTCAGTCACAAGATACATCTCGTTTTCCAAACTTTGTTAATGCAAGTTCTCAGGTTGTATCCCCTAGCCCAACTCCACCCCTGCAGAGCTCTATACCTGTGTCTCCACAGTCGGTTTCTATTTTCAGGCCACCATACCCTACTAACTTCTTCCCATATGGCCACTATTACCCCCCTATTTACGTGTCTCCAATACACCAATTTTTAAGCCATAATGGTTTCCCTCAACAGCCATCAGCTGGCAATATGTATCTACCAGCAGCTGCTGGGATAAAAATCCCTATCCCTCAATTCAAGGCAGGAGCAAACACGGGAAATACAGCTCATATTGGAATTCCTTCGGGATCGTTCATCACTCCACCTGTAGGATACGCACCTAGTCCAACAGTGAATACTGGAAGCTCCACTGGAAGTGATGATCTTGCAGTGTCTCAGTTGAAGGAAAATCAGATCTATACAACTGGACAGCTGAATGAAGGCTCTGCAGTGTGGATACCTGCACCAGGCCAAGATATATCCAGTTTGCAAGTTAATTCTCTGTATAACCTTGCCCCTCAGGGACAACATCTCACATTCTCCGCAACACAAGCTGCTCATGGGGCATTTGCTGGAATCTATCAAGCAGGGCAGTCAGTAGCTTCACCTTCAACTCTTTTGCAACAGTCTCAGGCTGTCGCTGGCCCTGTTGAAACTGTAGGCCTCCCTTCAGGATCTTATCAGCAGCCTCAGCCTGCACATGTCAATTGGAATTCTAATTTTTAG 2307 0.4495 MSGGGGSSNSRVPIPNNVRKIIQDIREITGKQHTDDEIYAVLKECSMDPNETAQKLLYLDTFHEVRRRRDRKKEGLSGRASEEYRLKQGGQGRGGRGASGGNSSNFPDGGGGRNLAIRRENGVNHNAERNHAPSTQPVLQKTKTSTTSQTTRVSAVALHAVANQSNGKSGHISAGQSPIGGVPKSSCDANDTGYQENAQPQAAVVAAASSTTPTFGSVTSTDQGKSLSRSDQLQTSVSGVYSSLDPVVASSVSRNPGSSGAISREVGSNWISSGPKDVQANKVVPHEVNDVSAPKNEKSESMNSTSKINALQKSNEVENNQFLEPSQVSSSSSLNGSLRPSSSSSSQPPQANVTEVSTSEACVQSSAEMRQHVTFPNHFQVPKALKSGLTFGSFDTFGPSEKSSSGTGGDNSPSALAASLGNDEAAASSNQSVSLTEQGDHLDYPHSSSYLIEKTPATEGNSITSTDTKVDQPKKENLLAPEAHPIPTVQTAQNYGLNFMSTMLGTQQIQFEGTEPQSQDTSRFPNFVNASSQVVSPSPTPPLQSSIPVSPQSVSIFRPPYPTNFFPYGHYYPPIYVSPIHQFLSHNGFPQQPSAGNMYLPAAAGIKIPIPQFKAGANTGNTAHIGIPSGSFITPPVGYAPSPTVNTGSSTGSDDLAVSQLKENQIYTTGQLNEGSAVWIPAPGQDISSLQVNSLYNLAPQGQHLTFSATQAAHGAFAGIYQAGQSVASPSTLLQQSQAVAGPVETVGLPSGSYQQPQPAHVNWNSNF* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1852 768 MobiDBLite consensus disorder prediction 67 151 - -
Apr9g1852 768 MobiDBLite consensus disorder prediction 165 194 - -
Apr9g1852 768 SUPERFAMILY UBA-like 14 75 IPR009060 GO:0005515
Apr9g1852 768 MobiDBLite consensus disorder prediction 250 276 - -
Apr9g1852 768 MobiDBLite consensus disorder prediction 399 443 - -
Apr9g1852 768 Pfam GBF-interacting protein 1 N-terminal 14 74 IPR009719 -
Apr9g1852 768 MobiDBLite consensus disorder prediction 212 231 - -
Apr9g1852 768 MobiDBLite consensus disorder prediction 250 307 - -
Apr9g1852 768 MobiDBLite consensus disorder prediction 324 363 - -
Apr9g1852 768 MobiDBLite consensus disorder prediction 67 81 - -
Apr9g1852 768 MobiDBLite consensus disorder prediction 127 151 - -
Apr9g1852 768 MobiDBLite consensus disorder prediction 453 472 - -
Apr9g1852 768 PANTHER FLOCCULATION PROTEIN (DUF1296) 2 768 IPR044277 -
Apr9g1852 768 MobiDBLite consensus disorder prediction 399 447 - -
Apr9g1852 768 MobiDBLite consensus disorder prediction 453 468 - -
Apr9g1852 768 PANTHER GBF-INTERACTING PROTEIN 1-LIKE 2 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1852 Apr-Chr9 27259214 27266398 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1852 - - gmx:100819602 1167.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1852 9 27259214 27266398 Apr9g1852 9 27259214 27266398 ECH