Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1850 ATGGCTGGGGTTGTCGAAAATCATCACCAATCCAAAGTTGTCATAGCTGATGATGAAGAGGTGGATGATTCTCCTATTGAGCAAGTGAGGCTTACAGTTCCAATAACCGATGACCCAACACAGCCAGCACTGACATTTAGGACATGGACTTTGGGGTTGGCATCATGCATTATCCTGTCATTTGTGAACCAATTCTTTGGTTACAGAACCAACCCTTTATTCATTTCTTCTGTGTCAGCTCAGATTCTCTCTCTCCCACTTGGGAAAATGATGGCTGCAACACTTCCCACCAAGCCAATTCCACTCCCTTTTACAAAATGGTCTTTTTCTTTGAACCCTGGTCCTTTCAGTTTGAAAGAACATGCACTTATCACCATCTTTGCTAGTGCTGGATCTAGTGGTGTTTATGCCATTAACATTATCACAATTGTTAAGGCTTTCTACCACAGGAGCATCCATCCACTGGCGGCTTTTTTGTTGGCCCTCTCAACCCAGATGCTTGGTTATGGATGGGCTGGGATTTTCAGAAAATTCCTTGTTGACTCCCCTTACATGTGGTGGCCTTCAAATCTCGTCCAGGTGTCTCTATTCAGGGCGTTTCATGAAAAGGAGAAAAGGCCTAAAGGAGGCAATACTAGGCTGCAATTCTTTTTCCTGGTCTTTGTATCAAGTTTTGCTTATTATGTAATTCCAGGCTACTTCTTCCAGGCAATATCAACAATATCCTTTGTTTGCTATATCTGGAAAGATTCTGTCCTTGCTCAACAGATTGGTTCAGGCATGAGAGGCCTTGGCATTGGCTCATTTGGCCTTGATTGGAACACAGTTGCTGGCTTTTTGGGCAGTCCTTTGGCTGTTCCTGGCTTTGCCATCCTCAACATGCTGGTTGGATTTGTGTTGTTTATTTATGTTCTGATTCCGATTGCCTATTGGAATAACTTATATGATGCCAAAAAGTTCCCCCTTATTAGTTCTCACACCTTTGATTCCACTGGTGCAACATATAATGTCAGTCGGATTCTGAATGCTAAGACTTTTGATATTGACATAGATAATTATAACAATTACAGCAAGCTCTATCTTAGTATCACATTTGCATTTGACTATGGATTGAGCTTTGCAACTCTGACCGCCACTATTTCACATGTTGCCCTCTTCCATGGAAAAACGATTTATCGTATGTGGACGAAGACAACAAGTGCACTAAAAGGAGAACTTGGTGATGTGCACACCAGAATTATGAAGAGAAACTATGAACAAGTACCTGAATGGTGGTTTGTCAGCATTTTAGTTCTAATGGTTGTTGTAGCCTTGATAACTTGCGAAGGCTTTGGCAAGCAACTCCAATTGCCGTGGTGGGGAGTCATATTTTCTCTAGCAATTGCATTAGTTTTCACTTTGCCAGTTGGGGTCATTCAAGCAACAACAAATATGCAAACCGGACTCAATGTGATTACAGAATTGATAATTGGGTACCTCTACCCAGGAAGGCCCCTTGCCAATGTAGCCTTCAAGACTTACGGGTACATCAGCATGTCACAGGCACTTGGGTTCCTTGGTGACTTCAAATTAGGCCACTACATGAAAATTCCTCCAAAATCTATGTTCATTGTGCAGTTGGTAGGGACAATAGTTGCTTCAGGGGTGTACTTTGGCACAGCATGGTGGCTTCTCTCAACTATTCCAAACATCTGTGATGAATCAGCATTGCCAAATGGTAGTCCATGGACATGCCCTGGTGATGATGTGTTCTACAATGCTTCAATCATATGGGGAGTAGTAGGGCCAAAGAGAATGTTTACAAAGGATGGCATTTATCCTGGGATGAATTGGTTTTTCCTCATCGGTCTACTTGCTCCTGTTCCAGTGTGGCTACTTGCTCGCAAATTCCCCAACCACCAGTGGATTGAACTCATCAACATGCCCCTCATCATTGCAGGTGCTAATGGTATCCCACCAGCAAGATCCGTGAACTATATAACTTGGGGGGTTGTTGGAATCTTCTTCAACTTCTACGTTTATAGTAGGTTCAAGGCATGGTGGGCTAGACATACATACATTCTTTCAGCTGCTTTAGATGCTGGGGTTGCTTTCATGGGTGTGTTGCTCTATTTTGCACTCCAAAATTATAATATTCCTGGTCCAGCATGGTGGGGTCTAGAAGCTGATGATCACTGCCCTTTGGCTAGATGCCCCACAGCTCCAGGTGTAACTGCTCCAGGATGTCCTATTCACTGA 2238 0.4325 MAGVVENHHQSKVVIADDEEVDDSPIEQVRLTVPITDDPTQPALTFRTWTLGLASCIILSFVNQFFGYRTNPLFISSVSAQILSLPLGKMMAATLPTKPIPLPFTKWSFSLNPGPFSLKEHALITIFASAGSSGVYAINIITIVKAFYHRSIHPLAAFLLALSTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFVSSFAYYVIPGYFFQAISTISFVCYIWKDSVLAQQIGSGMRGLGIGSFGLDWNTVAGFLGSPLAVPGFAILNMLVGFVLFIYVLIPIAYWNNLYDAKKFPLISSHTFDSTGATYNVSRILNAKTFDIDIDNYNNYSKLYLSITFAFDYGLSFATLTATISHVALFHGKTIYRMWTKTTSALKGELGDVHTRIMKRNYEQVPEWWFVSILVLMVVVALITCEGFGKQLQLPWWGVIFSLAIALVFTLPVGVIQATTNMQTGLNVITELIIGYLYPGRPLANVAFKTYGYISMSQALGFLGDFKLGHYMKIPPKSMFIVQLVGTIVASGVYFGTAWWLLSTIPNICDESALPNGSPWTCPGDDVFYNASIIWGVVGPKRMFTKDGIYPGMNWFFLIGLLAPVPVWLLARKFPNHQWIELINMPLIIAGANGIPPARSVNYITWGVVGIFFNFYVYSRFKAWWARHTYILSAALDAGVAFMGVLLYFALQNYNIPGPAWWGLEADDHCPLARCPTAPGVTAPGCPIH* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1850 745 PANTHER ISP4 LIKE PROTEIN 16 744 IPR004648 GO:0055085
Apr9g1850 745 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 28 708 IPR004813 GO:0035673
Apr9g1850 745 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 16 744 - -
Apr9g1850 745 Pfam OPT oligopeptide transporter protein 44 706 IPR004813 GO:0035673
Apr9g1850 745 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 22 710 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1850 Apr-Chr9 27249668 27253193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1850 6 744 Organic Solute Cotransporters AT5G55930 68.506 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1850 - - gmx:100776230 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1850 9 27249668 27253193 Apr9g1850 9 27249668 27253193 ECH