Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1839 ATGGGTGTGCAGGAAGTTGTTTGTAGATTTGGGGGCAAGGCCAGTATTGGTATGGGTGTGGAAAGCGTGCCAGAGAAAACTTTAGATGATATGAGTGAAAAGAAAGACTTGAAATCTGAGGGAGGAAAAGTGTTGGAGAGTAATGGAGTCAAAGGGTTGAAGGAGGACGGCATAAAAGAAATGGAAGTTGATAAGAAAGATGAAGTAGAAGAGGATAAGAAAGTTGATGATGGTGAAGTAGTAAATGACTTTAAGAAAGTTGGTTGTGTGGAAGAATTAGAAGATGATAAGAAAGTTGATCATGTGGAAGAAATACAAAAGGATAAAGAAGATAATGGTGTGAAAGAAATAGAAGAAGATAAGAAAGATGATGGTGTGAAGGAGATAGAGGAAGATAAGAAAGATGATGGTGCGAAAAAAATAGAAGAAGATAAGAAAGATGACGGTGTGAAAGAAATAGAAGATAAGAAAGATGAGGGTGTGAAAGAAATAGAAGAAGATAAGAAAGATGATGGTGTGAAAGAAATAGAAGAAAATAAGAAAGATGATTCTGTGAATGAGACAGGAGAAAATAAGAAGGATGGTGATGGGTTAAAATACGACAAATTGGATGAAGAAACTGAAGTTAAACAAACTGTGGATGATAAAGAAAAAAAGGAAGATGCTGAAGCTGAGGAACCAGAATTAGATGCAAAAGAAGATGAGAGCATCCCTATAGATAAAGGTGAGAGCAGTGAAAAGGAGAAGATTCTAGTAGAGGATGATGGGTTTGAGATTGAAGATAAGTTAAAAGAAGAAGATAAGGTGGAAGATATTAAGGTTGAGAAAGGTTTGAAAAAGCGAGGAAGAGGAAAGATCAATGGGGAGAAGGTGAAAAAGAAAAGAAAAGAACTGAAGGAGACAGAGCCCAGGACTCCTGCTATCAATCGCCCTGTGCGGGAAAGGAAAACAGTTGAGAGGTTGGTAACATCCATTGAGAAGGATGCCTCCAAAGAATTCCACATTGAAAAGGGTCGTGGTACACCTTTGAAAGATATACCCAATGTGGCCTTTAAATTCTCTAGAAGGAAGATTGATGATACTATCAAAATGCTCCATAACATCCTCTTTGGTAGGAGAGGGAAGGCGGTTCAAATGAAGAGCAATATATTAAGGTTTTCTGGTTTTGTGTGGAATGAAAATGAGGAAAAACAAATGATTAAAGTAAAAGAAAAGTTTGAAAAGTGTAACAAGGAGAGGTTGCTGGAATTCTGTGATGTGCTGGACATACCACTTGCAAAGGCAACAACAAGGAAGGAAGATATTATTGCAAAGCTAATAGACTTTTTGGTTACCCCTCAAGTCACAACAAATGTGCTTCTTGCAGAAAAGGAGAAGTCAACCAAGGGAAGAAAGCGCAAGCGCACAACTAGACAAGGTTCATCAAGATCTGGAACAACATCAAGACGTTCTGCTAAGATTCAGAAGAAAAATAAAGATTCTTCAGTAGCTGATGAAGTAAAGAGTACAACTGACACAGAAGATGAGTCGGAGGATGAAGAGAAAGATGAAGAAAATGAGGAGGAAAATGAAAATGGTGTTCCTGACAAATCTGAGGATGAAATGCCAGAGCAATCTGAAAGTGAGGATAAAAGTGATTCTGATAATGAATCTGAAGATGCAAAGAAACCAAGAAAAACTAATAAAACATCATCCACAAAGAAACAATCTGCTGCAAAAGGTAAAAGAAAGAAAAATACAGTTGAAACAAAATCTCGCTCAGCACCAAAGAGAATTTCTAAGAAAACACACTCAGAGTCTGATGATGATACTGAGGAAAGTCCAAAGGTCTCTTCAAGGAAGAAGCAAAATGAGAAACGAGGAAAGCAGAAGACCTTGACCATGACTAAGTCATCTTCCTCCAAAGAGAAAACTGCAGAAAAGGTTACTAAAGGAAAACGCAATAACAAAAAGTCAACTCCGAGTGATGATCAGTTACGTGATGCAACATGTGAAATTCTCAAAGAAGTTGACTTCAATACGGCTACATTTACTGACATTCTGAAGAAACTTGCCAAGCAATTTGATGTGGATCTCACCCCAAGAAAGGCATCTATAAAGATCATTATTCAGGAAGAGCTGACAAAACTAGCTGATGCAGCAGATGATGATGATGAAGAGGATGCTGAGACTCAATCAACCGGCCAAGACGTAGAAGCCTCTGAGGATTAG 2211 0.3799 MGVQEVVCRFGGKASIGMGVESVPEKTLDDMSEKKDLKSEGGKVLESNGVKGLKEDGIKEMEVDKKDEVEEDKKVDDGEVVNDFKKVGCVEELEDDKKVDHVEEIQKDKEDNGVKEIEEDKKDDGVKEIEEDKKDDGAKKIEEDKKDDGVKEIEDKKDEGVKEIEEDKKDDGVKEIEENKKDDSVNETGENKKDGDGLKYDKLDEETEVKQTVDDKEKKEDAEAEEPELDAKEDESIPIDKGESSEKEKILVEDDGFEIEDKLKEEDKVEDIKVEKGLKKRGRGKINGEKVKKKRKELKETEPRTPAINRPVRERKTVERLVTSIEKDASKEFHIEKGRGTPLKDIPNVAFKFSRRKIDDTIKMLHNILFGRRGKAVQMKSNILRFSGFVWNENEEKQMIKVKEKFEKCNKERLLEFCDVLDIPLAKATTRKEDIIAKLIDFLVTPQVTTNVLLAEKEKSTKGRKRKRTTRQGSSRSGTTSRRSAKIQKKNKDSSVADEVKSTTDTEDESEDEEKDEENEEENENGVPDKSEDEMPEQSESEDKSDSDNESEDAKKPRKTNKTSSTKKQSAAKGKRKKNTVETKSRSAPKRISKKTHSESDDDTEESPKVSSRKKQNEKRGKQKTLTMTKSSSSKEKTAEKVTKGKRNNKKSTPSDDQLRDATCEILKEVDFNTATFTDILKKLAKQFDVDLTPRKASIKIIIQEELTKLADAADDDDEEDAETQSTGQDVEASED* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1839 736 MobiDBLite consensus disorder prediction 95 253 - -
Apr9g1839 736 Coils Coil 150 170 - -
Apr9g1839 736 MobiDBLite consensus disorder prediction 234 253 - -
Apr9g1839 736 PANTHER PROTEIN DEK 172 721 - -
Apr9g1839 736 MobiDBLite consensus disorder prediction 26 42 - -
Apr9g1839 736 PANTHER DEK PROTEIN 172 721 IPR044198 GO:0003677|GO:0006325
Apr9g1839 736 MobiDBLite consensus disorder prediction 486 503 - -
Apr9g1839 736 Pfam DEK C terminal domain 654 707 IPR014876 -
Apr9g1839 736 MobiDBLite consensus disorder prediction 95 225 - -
Apr9g1839 736 MobiDBLite consensus disorder prediction 24 51 - -
Apr9g1839 736 MobiDBLite consensus disorder prediction 455 660 - -
Apr9g1839 736 MobiDBLite consensus disorder prediction 711 726 - -
Apr9g1839 736 MobiDBLite consensus disorder prediction 575 614 - -
Apr9g1839 736 Coils Coil 392 412 - -
Apr9g1839 736 MobiDBLite consensus disorder prediction 634 660 - -
Apr9g1839 736 SUPERFAMILY DEK C-terminal domain 649 707 - -
Apr9g1839 736 MobiDBLite consensus disorder prediction 504 528 - -
Apr9g1839 736 MobiDBLite consensus disorder prediction 710 736 - -
Apr9g1839 736 Gene3D - 645 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1839 Apr-Chr9 27173731 27181353 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1839 K17046 - gmx:100812631 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1839 9 27173731 27181353 Apr9g1839 9 27173731 27181353 ECH