Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1823 ATGCAATCATCGATGAGGTTGAGGCTGTTGCTTGTACTTTTACTTGTGTGTTTGCATTTGCTACTCTCTCATTTCACACCCTCCCATTCCTTGTGTAATCCCCATGACAGCTTTGCCTTGCTTCAATTCAAGAACTCATTCACCTTCAATACTACTCTTTATGATGATCCTTTTTTATATCATTCCTCTCAGTGCCTCCTTCCTCATCATAGGATCAAAACATGGGAAAATGAGACAGATTGCTGCTTATGGCTTGGGGTCACGTGCCATCCCATTTCTGGTCACGTGATCGGACTTGATCTCAGCTGCAGTGGGCTTTTGGGTGAAATCCATCCAAACAGTACCCTTTTCCGTCTTTCTAATCTCCAATCACTGAATCTTGCTCTCAATGATTTCTCTCAATCTCCATTGTCATCTCACTTTGGAGGGTTTTCAAGTTTGACACAACTCAACTTGTCGTCTTCTAACATTGGAGGAGAAATTCCATCCCAAATCTCACATCTTTCCAAATTAGTCTCACTTGATCTCTCTTGGAATTCTTTTCAGTTAAAATGGAAAGAAAGGAATTGGAAGAGGCTGCTCCAAAACGCAACAGTTTTAAGAGAGCTTATTTTGGATGAAACAGATATGTCTTCAACTTCACTCAAACCACTCAATCTCTCTTCCTCTTTGGTCACCCTTAGTCTTTTTGATACTCGAATAAGGGGAAACTTGACAAATGATAACATACTCTGTTTACCAAATCTTAAACACCTACATTTGTCATCTAATGATCTTGAAGGGCAGCTTCCGAAAGTGAGTTGTAGCATTGAACCATCTCTGAGTATCTTAGATCTTTCATATGGTCAGTTGCAAGGGTCAATTCCTCTCTCTTTCTCTAACCTCACACATCTTACATCCTTGGATCTCTCATACAACAACCTTAGTGGTTCAATCCCATCCTCACTTTTTACCCTTCCACTACTAACTTTTTTGCATCTCAGAGCTAATAATCTCAGTGGTCAAATCCCAAATGTCTTCCATCACTCAAACACATTTCAAGAAATAAATTTGGGTGAGAACCATATAGGAGGTGAGCTTCCATCATCACTTTCATACCTTCAACATCTCATTCGATTAGATCTTTCAAAGAATGAATTTAGCGGTCAAATCCCAGATGAGTTTGGTGGGCTAATCAATTTGGAAGCGGTCAGTCTCAGTGAGAACAAAATAGGAGGAAAAATCCCATCTTCATTGTTTGACTTAACTCATCTTTCTCTTCTGAATTGTTCTTATAATCAATTAGAGGGCCCTTTGCCCACCAAAATAACTGGCCTCTCTAACCTATTTCAATTATACTTAAATAACAATTTACTAAGAGAGACAATTCCGGCTTGGTGTTTGTCTTTGCCATCTTTGGGGATTTTAAATCTATCCACTAATCACTTCACACACTTCACATGGCCTACAAGTGCAATCCCATCGTATTCCCTGGTGTATCTAGATTTGTCCAACAACAAGCTGCAGGGAAATATTCCACAATCACTTTTCAGCTTTCCAAATCTTTTTGTCTTAGATCTATCATCAAACAACTTGAGCGGACATTTTCCACTCTTTTCCATGCTTCCAAATCTGGGGTCTCTTTCCCTATCACATAACAGTAAATTATCACTAAGCTTCACATCCGATGCCAATTACAGCTTCTACCCGCTTACAATTTTGGAGCTATCTTCCCTCACTTTGACTGAATTTCCCGAATCCTTACGACAATTCCAGAGTTTGCGACATCTGGATCTGTCCGTTAACAAAATTAATGGAAAAATACCCAATTGGTTACATGAAATGAATTCATTACAATTTTTGAACCTATCCCAGAACCTATTGACATCATTGATGGGCAATTTCCCTGACAATCTTGGTAGCCTTGATGTTAGTTTCAACTTACTCACTGGTGGCATCTCTTCCTCAATTTGCAATGCAAGTTCCCTTGAGGTTCTCAACTTGTCTTACAACAAGTTAACAGGAATTATTCCACAATGCCTTGGGAGCTTATCATACCTTGAAGCTTTGCATCTTCAAATGAATGAACTCTACGGATTTTTGCCAAATTTCTTTCCAAACAACAGCATGCTTACTGATCTAAATCTCAGTGGAAACCAGTTACAAGGTTCATTGCCTACATCTTTCTCCAAATGCACACAGTTGCAGGTTTTAAATCTCGGCAACAATCAAATTGAAGATACATTTCCTTATTGGCTTCACACACTGTCAAATTTGAAAGTACTGATTTTAAGAGCCAATAAGTTCCACGGTGATATCACTAGTTTGAAGACCAAGCACATCTTGCCAAATTTAACTATTTTTGATATCTCGGGCAATAATTTCAGTGGCTCATTACCAATAGCCTACATACAAAATTCTAAAGCAATGAAGAATTCTATTGGAATGGAAAGCTATATGCAATTTGAGAACAGGATATCTCGTAGGTACGACCAGTATTTATGGTATCACTTTCAATTATATGATTCCATGGTTGCAACAGTTAAAGGGATCAATATGATGTTCGCAAGAATTCCTACCATCTTTGCAGTTATTGATCTGTCAGCAAACAATTTTGACGGAGAGATTCCAAATGAAATTGGAGAGCTTCATGCAGTCATAGCGCTCAACCTTTCCCATAACAAACTCGTAGGTCCTATTCCTCAATCCATTGGAAATTTGAAAGGTCTTGAATCATTGGATTTTTCCTCAAATATGCTCACTGGTAGGATTCCTTCAGAGTTAAGCAATCTAAACTTTCTTGAATTCTTGAATCTTTCCCACAACCATCTTGTGGGAGAAATACCTCAAGGAAAGCAATTCAATACATTTTCAAATGATTCCTATGAGGGAAACTTGGGGTTATGCGGGGTCCCTTTGTCAATAAAATGTGACACAAACTCTGAACATCCTTCTTCACCTTCATCAACCTTGTGGAATGAACAAAAATTTGGTTTTGGTTGGAAACCAGTGGCAATAGGATATGGATGTGGAATGGTATTTGGGGTGGCCTTGGGATGTTGTGTAGTGTTAACAGGGAAGCCTCAATGGCTTGTGAGGATGCTTGGAAGTCAACCTGATAAAAGGGTGAAAAGAAGGACAAGGATTATGTCTCATGCAAGAATGAATGTGCAGATCTCATAA 3162 0.3884 MQSSMRLRLLLVLLLVCLHLLLSHFTPSHSLCNPHDSFALLQFKNSFTFNTTLYDDPFLYHSSQCLLPHHRIKTWENETDCCLWLGVTCHPISGHVIGLDLSCSGLLGEIHPNSTLFRLSNLQSLNLALNDFSQSPLSSHFGGFSSLTQLNLSSSNIGGEIPSQISHLSKLVSLDLSWNSFQLKWKERNWKRLLQNATVLRELILDETDMSSTSLKPLNLSSSLVTLSLFDTRIRGNLTNDNILCLPNLKHLHLSSNDLEGQLPKVSCSIEPSLSILDLSYGQLQGSIPLSFSNLTHLTSLDLSYNNLSGSIPSSLFTLPLLTFLHLRANNLSGQIPNVFHHSNTFQEINLGENHIGGELPSSLSYLQHLIRLDLSKNEFSGQIPDEFGGLINLEAVSLSENKIGGKIPSSLFDLTHLSLLNCSYNQLEGPLPTKITGLSNLFQLYLNNNLLRETIPAWCLSLPSLGILNLSTNHFTHFTWPTSAIPSYSLVYLDLSNNKLQGNIPQSLFSFPNLFVLDLSSNNLSGHFPLFSMLPNLGSLSLSHNSKLSLSFTSDANYSFYPLTILELSSLTLTEFPESLRQFQSLRHLDLSVNKINGKIPNWLHEMNSLQFLNLSQNLLTSLMGNFPDNLGSLDVSFNLLTGGISSSICNASSLEVLNLSYNKLTGIIPQCLGSLSYLEALHLQMNELYGFLPNFFPNNSMLTDLNLSGNQLQGSLPTSFSKCTQLQVLNLGNNQIEDTFPYWLHTLSNLKVLILRANKFHGDITSLKTKHILPNLTIFDISGNNFSGSLPIAYIQNSKAMKNSIGMESYMQFENRISRRYDQYLWYHFQLYDSMVATVKGINMMFARIPTIFAVIDLSANNFDGEIPNEIGELHAVIALNLSHNKLVGPIPQSIGNLKGLESLDFSSNMLTGRIPSELSNLNFLEFLNLSHNHLVGEIPQGKQFNTFSNDSYEGNLGLCGVPLSIKCDTNSEHPSSPSSTLWNEQKFGFGWKPVAIGYGCGMVFGVALGCCVVLTGKPQWLVRMLGSQPDKRVKRRTRIMSHARMNVQIS* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1823 1053 SUPERFAMILY L domain-like 615 967 - -
Apr9g1823 1053 PRINTS Leucine-rich repeat signature 298 311 - -
Apr9g1823 1053 PRINTS Leucine-rich repeat signature 653 666 - -
Apr9g1823 1053 ProSiteProfiles Leucine-rich repeat profile. 297 319 IPR001611 GO:0005515
Apr9g1823 1053 Gene3D Ribonuclease Inhibitor 627 978 IPR032675 -
Apr9g1823 1053 Gene3D Ribonuclease Inhibitor 29 138 IPR032675 -
Apr9g1823 1053 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 17 345 - -
Apr9g1823 1053 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 283 375 - -
Apr9g1823 1053 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 344 434 - -
Apr9g1823 1053 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 428 1005 - -
Apr9g1823 1053 Gene3D Ribonuclease Inhibitor 343 456 IPR032675 -
Apr9g1823 1053 SUPERFAMILY L domain-like 78 356 - -
Apr9g1823 1053 Pfam Leucine rich repeat N-terminal domain 34 89 IPR013210 -
Apr9g1823 1053 Pfam Leucine Rich repeat 247 261 IPR001611 GO:0005515
Apr9g1823 1053 SMART LRR_typ_2 367 390 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 119 143 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 900 924 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 295 319 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 439 463 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 144 168 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 391 415 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 608 631 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 702 724 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 246 270 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 677 700 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 654 676 IPR003591 -
Apr9g1823 1053 SMART LRR_typ_2 489 512 IPR003591 -
Apr9g1823 1053 Gene3D Ribonuclease Inhibitor 457 559 IPR032675 -
Apr9g1823 1053 Gene3D Ribonuclease Inhibitor 206 342 IPR032675 -
Apr9g1823 1053 SUPERFAMILY L domain-like 273 622 - -
Apr9g1823 1053 Pfam Leucine rich repeat 490 546 IPR001611 GO:0005515
Apr9g1823 1053 Pfam Leucine rich repeat 564 621 IPR001611 GO:0005515
Apr9g1823 1053 Pfam Leucine rich repeat 882 937 IPR001611 GO:0005515
Apr9g1823 1053 Pfam Leucine rich repeat 631 690 IPR001611 GO:0005515
Apr9g1823 1053 Pfam Leucine rich repeat 272 332 IPR001611 GO:0005515
Apr9g1823 1053 Pfam Leucine rich repeat 704 762 IPR001611 GO:0005515
Apr9g1823 1053 SMART LRR_sd22_2 415 441 - -
Apr9g1823 1053 SMART LRR_sd22_2 295 310 - -
Apr9g1823 1053 SMART LRR_sd22_2 584 607 - -
Apr9g1823 1053 SMART LRR_sd22_2 629 655 - -
Apr9g1823 1053 SMART LRR_sd22_2 725 754 - -
Apr9g1823 1053 SMART LRR_sd22_2 900 926 - -
Apr9g1823 1053 Gene3D Ribonuclease Inhibitor 560 626 IPR032675 -
Apr9g1823 1053 Gene3D Ribonuclease Inhibitor 139 191 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1823 Apr-Chr9 27065039 27069492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1823 5 1039 Receptor kinase-like Gene Family AT2G15080 35.748 4.21e-145 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1823 - - lja:Lj2g3v3223950.1 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1823 9 27065039 27069492 Apr9g1823 9 27065039 27069492 ECH