Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1813 ATGGCTACATTGAAGGCTATCTCTGCAGCTCTGAAACTAGTGGAAGCAAAGAAACAGAATCTGAAGGAAGCCTACGATGATATTCAATCTCACTCCTCTCTTCTCTCCTCTTTCTCTCTTTCATGGTCCCACATCGATTCCCACTTCACCTCCATTCAAAATTCCCTCACTCAACGCTTCATCTTCCTTCAATCCCTTGAATCTCAACAACAACCACCCCACAACAACCCATCACCCTCTACCTCCAAATTATCCCATTCAAATCCCAAAGATCCCAACTTTTTTCCATTCCCTAACGACCCACCTTCTTCTTCCGACCCAAATGGAACCTCTACATTGCCCAAAAACCATGCAGAGCAGTTGTGTGCGCTGTGCAAGAACATGGACGGAAAGGGGTTGAGGGATTACGTTGGGGAGCACTTGAGAGACAAGGTTGTGATCAAGGTTGAGCTTAGGAGTGCCTTAAAGTTTGCCTCTGATGCTGCATCCATGGTTCTTGATTCCTTGGATGGTGTTGTGGGTGCAAATGCAGTGAAGGATGATAAGGTACTGCGCAGAATGAAGAAGTGTTGCAGTGTGTTGTTCCAGCAGATGAGGGCTGTGTCTACGTTTGTGAGTTCTAATGTGAGGAAGAAAGCCAAGAGGTTGGGTGCAGAATGGAAGGTAAGCTTGGTGAATGATAATGCTGATGCAGTGGGTGCTATGGCTTTCTTGCATTTTGTGGCGGCTTATGGTTTGCTTTCTGAGTTGACCATGAATGAGCTCGCCACCTTTTCTGCAATGGCTGCTGCTAACGATGAGCTTCCTGAGCTTTACCAGATTATCGGTTTGACAGATAAAGTTCCAGGTCTTATTCAGAAACTTCTTGATAAGGGAAAACATATTCTGGCTGTCTAGTATGTTTTTGAGTTCAATCTTGCTGATAAGATCCCACCGGTTCCAATTTTGAAAGCTCATGTAAATGAATCTCAGAAACTTGCTAGGAGACTTTCCCAGGAAGGAAAGTCACTTAATGAGATCACAGCTAGAGAAATTCATGCACTGAAATCGGTGATTAAGGTTATTGAGAGTCATAATCTTGAATCTGAATATCCACGTGCCAGCCTAGAACAGCGTATAGAGCAATTGATGAAGCAAAAGACAAATGTAAAACAGGCTGTGCCGTCTTTTGCTGCAAAGCCTCCTCAGCATCAGCAGCTACAAAGTGGGATCAAGCGTCCTCGAATATCTGCTCCAGTTGGTCCCGCAGATGTCCTGAATAATGTCACTAGTGCCAGTTCATCCGTACACCACTACCAACAACCTACTTTCCAGTCTCCTGGTTTGTTGCTGGAACATCCAAATCCGTGCATGAACTTGCCACCCATGCCGTATGGCATGATGGCTTCAACCTCAACCATCTTGCCTTATACAGGCCCTTCAACTGGGCCTTATGATCTTGATGGTGTCCCAATGGGTCCCAATGGCAACCTTGGTCAAGGTTGTTCTCTTCCAAATTCATCAGCATTGGGTTATCATGATTGTGTCTCTGCTTATAGTGGTTATGGTTTGCAACATTGTTACCAAACATCTTATCCACAATAG 1584 0.4489 MATLKAISAALKLVEAKKQNLKEAYDDIQSHSSLLSSFSLSWSHIDSHFTSIQNSLTQRFIFLQSLESQQQPPHNNPSPSTSKLSHSNPKDPNFFPFPNDPPSSSDPNGTSTLPKNHAEQLCALCKNMDGKGLRDYVGEHLRDKVVIKVELRSALKFASDAASMVLDSLDGVVGANAVKDDKVLRRMKKCCSVLFQQMRAVSTFVSSNVRKKAKRLGAEWKVSLVNDNADAVGAMAFLHFVAAYGLLSELTMNELATFSAMAAANDELPELYQIIGLTDKVPGLIQKLLDKGKHILAV*YVFEFNLADKIPPVPILKAHVNESQKLARRLSQEGKSLNEITAREIHALKSVIKVIESHNLESEYPRASLEQRIEQLMKQKTNVKQAVPSFAAKPPQHQQLQSGIKRPRISAPVGPADVLNNVTSASSSVHHYQQPTFQSPGLLLEHPNPCMNLPPMPYGMMASTSTILPYTGPSTGPYDLDGVPMGPNGNLGQGCSLPNSSALGYHDCVSAYSGYGLQHCYQTSYPQ* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1813 526 Coils Coil 4 31 - -
Apr9g1813 526 MobiDBLite consensus disorder prediction 68 89 - -
Apr9g1813 526 PANTHER FRIGIDA-LIKE PROTEIN 1 523 - -
Apr9g1813 526 Coils Coil 365 385 - -
Apr9g1813 526 MobiDBLite consensus disorder prediction 68 113 - -
Apr9g1813 526 Pfam Frigida-like protein 117 385 IPR012474 -
Apr9g1813 526 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 1 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1813 Apr-Chr9 27006382 27008377 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1813 - - aprc:113847716 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1813 9 27006382 27008377 Apr9g1813 9 27006382 27008377 ECH
Apr2g0269 2 3269739 3274089 Apr9g1813 9 27006382 27008377 PCT