Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1800 ATGGTATACAGCTCCTATGGATATGCTTCATCCATGTTGATGTATGAGTCAAGGAAATGGGGATCTCCTCCACTGGTCATTGCACGTGGTGGGTTTTCAGGGATATTTCCAGATTCAAGTTCAGATGCCTATAATTTGGCACTGAACACTAGTGTTCCAAATGTCATTCTATGGTGTGATTTGCAGTTGACAAAGGATGAAGCTGGGATTTGTTTTCCAGACCTGAAGCTAGACAATGCCACTGATATTTCCTTCATGTACCCAGCCAGAGCCAAGAGTTACTTAGTTAATGGGGTTCCAACCAAGGGATGGTTTTCCATTGATTACAACTTGACAGAACTAACAGGTGTCTCACTTATGCAAGGAGTCTACACTCGAAGCTATAGCTTTGACGGAAATAAATATCACATTCTTACTGTTGAAGAAGTGATTAAATTGGTAAAATCACCATCAGTGGGCCTGTGGTTGAATGTTCAGAATGATGCATTCACCAAGGAAAGGAAATTGAGTACAGAAAGATATCTACTTTCTCTGCCTACCAAAGTCAGTTACATTTCATCTCCTGATGTGGCTTTCTTGAGCCGCATAAAATCAGTCGTCAGACCTAGAACAACCAAACTAGTCTTTAGGTTTCTAGAGAAGAATGAGACAGAACCTGCTACCCATCAGACTTATGGATCACTCTTGAAAAATCTCAAGTACATCAAGACATTTTCTTCTGGAATTCTTGTCCCCAAGGATTATATATGGCCAGTGGATCATCACCTTTATCTACAACCGCATACCTCTCTTGTCTCAGATGCTCATAGAGAAGGGCTGCAAGTTTTTGTGTCAGACCTTGTTAATGATGTTCCATTTAGCTACAATTTTAGTTATGATCCTCTTGCTGAATGTCTGTCTTATATTGACAATGATGAATTCTCAGTTGATGGTGTACTTTCTGACTTCCCAATAACTCCATCCGCAGCCATAAATTGCTTTCATGGCCTAGAGAAAAATGCCACAAAACAAGTGGAGACTCTGGTTATATCAAAATATGGAGCAAGTGGAGACTATCCTGCTTGTACTGACTTGGCTTATAAGCATGCTATATCTGATGGAGCAGATATACTCGACTGTCCAGTTCAGATGTCCAAGGATGCAATACCATTTTGCTTAAGCTCAATAGATCTTACGGAAAGCACAACCGTTGCTAAATCAAAATTCAGGAACCTTACAACAACTATTCCAGAGATTAAATCTGGCAGTGGCATTTATGCTTTCAACTTGACATGGAATGAGATAAAAACCTTGACTCCCTCAATATTGAACCCCTATGAAAAATTTCGTTTGCTACGGAATCCAAAATTCAGAAATCAGGGAACATTTTTAAACTTGTCTGATTTTTTGTCCTTGACAAAAGGTCAGACAACTGGTCTCTTGATCAGCATAGAGAATGCAGAGAAGCAGGGACTAAGCATGATCACCAATGTAGTCCTTGATGCTTTGCAAAAAGCAGATTATGACAAGCCAGGGCCCCAAAAAATTATGATCCAGTCTACTCATAGCTCCGTACTAAAGATATTCAAAGAGAGAACCAAATATGAAAGGGTGTACAAGGTTGATGAGAATATTGGTGATGCTCTTGATTCAGCTGTTGTGGACATCAAGGCATTTGCCGATTCTGTGGTGATTGGAAAGGAATCTGTTCTTCCTCTAACTTCAACCTTTCTAGTTAACTATACACACACTATAGCAAGGCTAAAATCATTTAACCTCTCAGTTTATGTAGAAACTTTCAGCAATGAGTTTGTATCTCAAGCGTGGGACTACTATGCAGATGCATTTGTTGAGATAAATTCATTTGTTATGGGAGCCAAAGTTAATGGCATTATCACAGACTTCCCTAAGACAGCTGATAGATACAGAAAAAACAGGTGTTTAAAGCAAGGCAACAAAAATGCTTATATGAATCCTGTTGAACCTGGCAGGCTCTTAAAACAAATTTCCCAGGATTACTTACCACCACCTGCTCCTTCACTTCCAATCTTGACTGATAATAATGTGACAGAGCCACCTTTGCCTGCTGTTTCTCCAGCCCCCACCACAGCATAA 2094 0.3988 MVYSSYGYASSMLMYESRKWGSPPLVIARGGFSGIFPDSSSDAYNLALNTSVPNVILWCDLQLTKDEAGICFPDLKLDNATDISFMYPARAKSYLVNGVPTKGWFSIDYNLTELTGVSLMQGVYTRSYSFDGNKYHILTVEEVIKLVKSPSVGLWLNVQNDAFTKERKLSTERYLLSLPTKVSYISSPDVAFLSRIKSVVRPRTTKLVFRFLEKNETEPATHQTYGSLLKNLKYIKTFSSGILVPKDYIWPVDHHLYLQPHTSLVSDAHREGLQVFVSDLVNDVPFSYNFSYDPLAECLSYIDNDEFSVDGVLSDFPITPSAAINCFHGLEKNATKQVETLVISKYGASGDYPACTDLAYKHAISDGADILDCPVQMSKDAIPFCLSSIDLTESTTVAKSKFRNLTTTIPEIKSGSGIYAFNLTWNEIKTLTPSILNPYEKFRLLRNPKFRNQGTFLNLSDFLSLTKGQTTGLLISIENAEKQGLSMITNVVLDALQKADYDKPGPQKIMIQSTHSSVLKIFKERTKYERVYKVDENIGDALDSAVVDIKAFADSVVIGKESVLPLTSTFLVNYTHTIARLKSFNLSVYVETFSNEFVSQAWDYYADAFVEINSFVMGAKVNGIITDFPKTADRYRKNRCLKQGNKNAYMNPVEPGRLLKQISQDYLPPPAPSLPILTDNNVTEPPLPAVSPAPTTA* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1800 697 ProSiteProfiles GP-PDE domain profile. 24 324 IPR030395 GO:0006629|GO:0008081
Apr9g1800 697 SUPERFAMILY PLC-like phosphodiesterases 340 636 IPR017946 GO:0006629|GO:0008081
Apr9g1800 697 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FAMILY PROTEIN 20 691 - -
Apr9g1800 697 CDD GDPD_SHV3_repeat_2 341 635 - -
Apr9g1800 697 ProSiteProfiles GP-PDE domain profile. 340 636 IPR030395 GO:0006629|GO:0008081
Apr9g1800 697 CDD GDPD_SHV3_repeat_1 24 323 - -
Apr9g1800 697 Pfam Glycerophosphoryl diester phosphodiesterase family 59 318 IPR030395 GO:0006629|GO:0008081
Apr9g1800 697 Pfam Glycerophosphoryl diester phosphodiesterase family 347 631 IPR030395 GO:0006629|GO:0008081
Apr9g1800 697 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 20 691 - -
Apr9g1800 697 SUPERFAMILY PLC-like phosphodiesterases 23 323 IPR017946 GO:0006629|GO:0008081
Apr9g1800 697 Gene3D Phosphatidylinositol (PI) phosphodiesterase 339 635 IPR017946 GO:0006629|GO:0008081
Apr9g1800 697 Gene3D Phosphatidylinositol (PI) phosphodiesterase 23 323 IPR017946 GO:0006629|GO:0008081
Apr9g1800 697 MobiDBLite consensus disorder prediction 673 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1800 Apr-Chr9 26917348 26922747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1800 21 697 Receptor kinase-like Gene Family AT4G26690 55.394 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1800 - - gmx:100799882 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1800 9 26917348 26922747 Apr9g1800 9 26917348 26922747 ECH
Apr2g0250 2 3083446 3095224 Apr9g1800 9 26917348 26922747 PCT