Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1796 ATGGCACAGTCTAGTGGCAACACTTTGGTTCAGTGGCTGGTAGCAGCACTTCTTATTTCCTTGTTGAGTGGTGCCAAACCTTTTCAGATATGTAACATAGACTCAAATCAGCTAAAATTATGTCGTGCAGCAGTTAGTGGTCAAAACCCGCCACCACCAGATGAAAAATGTTGTGCAGTTATTCGCCAGGCCAATTTGCCGTGCCTTTGCGGATACAAGTCCATCCTCCCTTCAATTGGAATAAACCCCAAAAATGCTTTGGCTTTGCCTGGTAAATGTGGTATGAAAAACCCTCCTAATTGTTGA 306 0.4379 MAQSSGNTLVQWLVAALLISLLSGAKPFQICNIDSNQLKLCRAAVSGQNPPPPDEKCCAVIRQANLPCLCGYKSILPSIGINPKNALALPGKCGMKNPPNC* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1796 101 CDD nsLTP_like 31 99 IPR044741 -
Apr9g1796 101 Pfam Probable lipid transfer 27 100 IPR016140 -
Apr9g1796 101 PANTHER LIPID TRANSFER PROTEIN 1 101 - -
Apr9g1796 101 PANTHER LIPID BINDING PROTEIN-RELATED 1 101 IPR039265 GO:0005504|GO:0009627
Apr9g1796 101 SMART aai_6 31 101 IPR016140 -
Apr9g1796 101 Gene3D - 28 101 IPR036312 -
Apr9g1796 101 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 100 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1796 Apr-Chr9 26899324 26899629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1796 1 100 Acyl Lipid Metabolism Gene Families AT5G55410 36.893 1.30e-23 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1796 - - gmx:100527644 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1796 9 26899324 26899629 Apr9g1796 9 26899324 26899629 ECH