Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1794 ATGAAAAGGGGTAAGGCATCGTCTTCAGATGATGAGACTGAGGTGAAGCCTCTCTCTGTGTCGAATTACCATCTTGTAGACGAAGATGACACTCCTGTGTCTTTTTCTGTATTGCCAATTCAATGGAGTGGTTCTAAGAATTCTGATGCCAACCAAGGCCATGTGTTCCTACACGGGTTCGCTGATAATGGGTTGCAGAAGATTTTCATGCAAGTTACCGCGTGGAGATTTGATCTTTCCAATGTAAAACCCGAGATATCCTTGCTATCGAAGGATGGAAGCTGGATCAAGCTTCTGAGGCCTAGGAAGAGCTTTCAGGATACTGTGAGAACCATTTGGATCACCCTTCGTTTCCTGCATCGTGTGAAAAAAAATCGACGATTGTCTGCGGTATCTGTCTGGAAAGGCTTGCGTAAGGATAAGGAGTTGAGCTCTTATCGGGTTAAGGCTTCAGAAAGCGATTTATTGGACCATGTGCCTTTGATTGGTGAAGCTGCCAAAAGAGATGCTGTATTAGCTAAGTCCAAGCTTTTGCTCATGGTTTTGGAGAAGCTGGAGAGTCAGAAACTTCTTGATAAGGGAGTTAAAGATTTGGCACAACCTGGACTTACAGTTGGTATTGACAGTGATAGGGTAGATGAAGCTAATGAAGAGTCAGAAGAAGAGGATGATTTGTTTTGTTCTGTTTGTGCACTTTGTGACAATGGTGGTAATCTTTTGTGTTGTGAAGGACCATGCATGAGGTCATTTCATGCTACTGAGGAGGATGGTAAAGAAGTTAGTTGTGATTCTCTTGGTTTCACCCAGAAGGAAGTTGATGAGATCCAGAGCTTTTATTGTAAGAATTGTAAATATTGTCTGCACCAATGCTTTGCATGTGGCAAGCTGGGGTCTTCTGATAAAGTTAAGGGTGCTGAGGTCATTAAATGTGCTTCTGCAACCTGTGACCGTTTTTATCATCCACATTGCGTTGCTAAGTTACTTCCCCAGGTAGTTAAGCATGTTGCAGAGGAACTCGAGAGAAATATTGCTGATGGGGATCCTTTTACTTGTCCCCTTCATTATTGCTGTGTCTGTAAGGAATTGGAAAATAAGATAGATCCTGAGTTGCGATTTGCTGTTTGCTGGAGATGTCCAAAGTCATATCATCGCAAATGTTTGCCAAGAGAAATCGCTTTTGAGGACAAAGATGATGAACATATTATAACAAGAGCTTGGGAAGAACTTTTACCAAACAATCGCATTCTTATATATTGCTTAAATCACGAGATTGATGATAAACTTGGGACTCCTATAAGAGATCATATAAAATTCCCCAGCAAGAAAGCTACTGTTCAAGAAATTAATCCTAATTATCCTACTATTGAGCGAAAGAAACCTGGATCTAAAGAGAGAATTATATTGAAGAAGAAAAATGTTGACTTAGATGATTCATCTGGCGAAAGCATTGCTAAAGGATCCAAATTGACTGCAAAGCTGTCTTCTGGCGAAGTTGGCAGAAAGAAGCAGGCTGATACGAAATCAAATGAATCATCAAGTTGTTTGAATGAAAATAAGAGTTCAATGTCAAAGAAATGTGAAATGCCTGACTGTGAGGAAAACCATAACCAGCCTCCAACAGGTGAGAAATTATATGCTCTCAAGAATGAGGGTTCAGATCAAATCAAGCCTGACAATCAGGTCAATAATGTGATTAATAAGTCCCTGTTTGTCAAGCCTATTAGAAAGCTGAGTACTGCATTACCTCCATTAGATGATGATTCAGAAAAGAGTTTGTTGGCTTTGTTTAAAGAATCTAAATCATCAATTACATTGGAGAGTGTCTTAAAAAAGCACACAATTTCTTCTACTTGTGCTCGCTCATTGAGAAATGTTCTGGAGAAGACCATTACAATGGGGAAGCTGGAAGGCTCAGTTGACGCTGTTCGAATAGCTCTAAGGAAGCTGGAGAGTGGATGCAGCATTCAGGATGTACAAGCTGTTTGTGACCCTGATGTTCTGAAACAGATTTTGAAGTGGAAGCTTGTTGATAAGCTACATTGGTATGTTCAGAATGGTGATACTATTGTTGACTTTTCCTGTGGTGCTAATGATTTTAGCACCCTTATGAAGAAAAAGCTTGAGGAGACTGGAAAGAAATGCTCATACAGAAACTATGATTTACTTCCAATAAAGAATGATGCTAGTTTTGAAAGGAGGGATTGGATGACTGTCCAACAAACTGAGTTGCCTACAGGGTCACAGTTGATCATGGGGTTCAATTCCACCTTTGGGCTTGAAGCAGCTTTGGCTAACAAGTTTATAGATAAGGCTCTTGAGTTTAAACCAAAGCTCTTGATTCTTTTAGTACCACCAGAGACTGAGAGGCTTGATAAAAAGCGATCACCATATGATCTTATATGGGAGGATGGGAATTTTCTATCAGACATGTCATTTTATCTGCCGGGATCAGCTGATGTAAATGACAGACAAATAGACCAAAGGAATGTAAGGCTGCCTCTACTCTCCCTTTGGAGCCTTCCTGACTGGACTACTAAACACAAGGTCATAGCCCAGGAGCATGGTCATGTGTCCATCCAGCATGAAGTATTACTCATAGAAAGTTGTAATACTGACATGTTGGCTGTTGATCATACCCCGGGGGAAAATTATGCTGACAACTGTGGTGATCATGATCACTTGAAGTCAGCTGATGATCAAGAATATCAAACATGTATAAATGGTCAGAAAAGAAGCCAACATCATGGTAATGTTGACCAAGAGCATCAAGGACAGAAGTATAGGATGGGCAAGTCTGGCAAGACACCTCAGAAGAGAAAACATATTGAGGAAAATAATAGAACACGAGTAGGCCTGGTCTCACCAGCCAGAAGGCAGGCCATAAAAAGAATACTTGAGGGAGTACCTGATCATAGTCAACCCAATCCAATCAATGGGAGATCCTCAGGTGAAGCTTTTCAGCCCAAATCTGTGATGGCCTGTCCCCATGTTGAGATTAGAGAAGGGTCAAATGTTGCCGGTCCCAAATCTGATGGCCTTTGTGGTATTGAGGATCCTGATTCTAATCGTCTATCTGGTCATGATCCTTCCTGTGGCAACACTGGATGTAGTAGTGCGCAACTAGTTTCAGTAACACAGATATCTTGTAAGACGAATACACCAGCTATGGAACAAGATGAAGCTAGCCTAGATGAATTAAACCATGCCAGGATAAGTTCTTTGGGCTCTGAACCCCGTTCTTTTAGTAAAAGTGGCACTCTTGGACGTAGTGTACTCCAACCTGGATATGGTGGTGGGCTGCTCGGTTTTGCACCTGGTCCTAACCTTGCATATTCATGCCAGCATTCGGCTGGTTGGCTCGAGGAGTAG 3369 0.4153 MKRGKASSSDDETEVKPLSVSNYHLVDEDDTPVSFSVLPIQWSGSKNSDANQGHVFLHGFADNGLQKIFMQVTAWRFDLSNVKPEISLLSKDGSWIKLLRPRKSFQDTVRTIWITLRFLHRVKKNRRLSAVSVWKGLRKDKELSSYRVKASESDLLDHVPLIGEAAKRDAVLAKSKLLLMVLEKLESQKLLDKGVKDLAQPGLTVGIDSDRVDEANEESEEEDDLFCSVCALCDNGGNLLCCEGPCMRSFHATEEDGKEVSCDSLGFTQKEVDEIQSFYCKNCKYCLHQCFACGKLGSSDKVKGAEVIKCASATCDRFYHPHCVAKLLPQVVKHVAEELERNIADGDPFTCPLHYCCVCKELENKIDPELRFAVCWRCPKSYHRKCLPREIAFEDKDDEHIITRAWEELLPNNRILIYCLNHEIDDKLGTPIRDHIKFPSKKATVQEINPNYPTIERKKPGSKERIILKKKNVDLDDSSGESIAKGSKLTAKLSSGEVGRKKQADTKSNESSSCLNENKSSMSKKCEMPDCEENHNQPPTGEKLYALKNEGSDQIKPDNQVNNVINKSLFVKPIRKLSTALPPLDDDSEKSLLALFKESKSSITLESVLKKHTISSTCARSLRNVLEKTITMGKLEGSVDAVRIALRKLESGCSIQDVQAVCDPDVLKQILKWKLVDKLHWYVQNGDTIVDFSCGANDFSTLMKKKLEETGKKCSYRNYDLLPIKNDASFERRDWMTVQQTELPTGSQLIMGFNSTFGLEAALANKFIDKALEFKPKLLILLVPPETERLDKKRSPYDLIWEDGNFLSDMSFYLPGSADVNDRQIDQRNVRLPLLSLWSLPDWTTKHKVIAQEHGHVSIQHEVLLIESCNTDMLAVDHTPGENYADNCGDHDHLKSADDQEYQTCINGQKRSQHHGNVDQEHQGQKYRMGKSGKTPQKRKHIEENNRTRVGLVSPARRQAIKRILEGVPDHSQPNPINGRSSGEAFQPKSVMACPHVEIREGSNVAGPKSDGLCGIEDPDSNRLSGHDPSCGNTGCSSAQLVSVTQISCKTNTPAMEQDEASLDELNHARISSLGSEPRSFSKSGTLGRSVLQPGYGGGLLGFAPGPNLAYSCQHSAGWLEE* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1794 1122 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 675 962 - -
Apr9g1794 1122 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 7 674 - -
Apr9g1794 1122 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 407 IPR013083 -
Apr9g1794 1122 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 227 287 IPR013083 -
Apr9g1794 1122 SMART PHD_3 226 284 IPR001965 -
Apr9g1794 1122 SMART PHD_3 289 355 IPR001965 -
Apr9g1794 1122 SMART PHD_3 356 423 IPR001965 -
Apr9g1794 1122 PANTHER ENHANCED DOWNY MILDEW PROTEIN 7 674 - -
Apr9g1794 1122 PANTHER ENHANCED DOWNY MILDEW PROTEIN 675 962 - -
Apr9g1794 1122 Pfam Cytosine specific DNA methyltransferase replication foci domain 20 133 IPR022702 -
Apr9g1794 1122 MobiDBLite consensus disorder prediction 914 928 - -
Apr9g1794 1122 MobiDBLite consensus disorder prediction 910 940 - -
Apr9g1794 1122 MobiDBLite consensus disorder prediction 508 522 - -
Apr9g1794 1122 CDD PHD2_NSD 289 354 - -
Apr9g1794 1122 MobiDBLite consensus disorder prediction 476 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1794 Apr-Chr9 26876974 26887600 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1794 - - aprc:113845862 2254.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1794 9 26876974 26887600 Apr9g1794 9 26876974 26887600 ECH