Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1790 ATGGCCATGCTTCATCCCCTCACAAACCCAAACGAGCTTCTCTGCTCTTCTATCTACCACAATGCAATTGCTCTCACTACCTCTGTTTCTCTCAACCCCAGAACAACAAGAATTGCCCCACAACGCCTCACTCGCCGTTACGTGTCGGTGAGATGTTCCTACGCTTATGAAGATAACGCTAGGATTAAGGTTGTCGGAATCGGTGGTGGTGGCAACAATGCCGTTAATCGCATGATCGGTAGTGGTTTGCAGGGTGTAGACTTCTATGCAATAAATACTGATGCTCAAGCACTGTTACATTCTGCTGCTGAGAACCCTATAAAAATTGGAGAAGTTCTCACTCGTGGATTAGGTACTGGTGGGAATCCACTTTTGGGGGAACAAGCTGCGGAGGAGTCAAGAGAAGCTATTGCTGATGCTCTTAAAGGATCAGATTTGGTGTTCATAACAGCTGGGATGGGTGGTGGAACAGGGTCTGGTGCTGCCCCAGTTGTGGCCCAAATATCTAAAGAGACAGGTTACTTGACTGTCGGTGTTGTTACCTATCCCTTCAGTTTCGAAGGACGTAAAAGATCCCTGCAGGCCTATGAAGCCATTGAAAAGCTGCAGAAAAATGTCGATACACTTATAGTGATTCCAAATGACCGTCTGCTTGACATAGCTGATGAGCAGATGCCTCTTCAGGATGCTTTCCGTCTTGCAGATGATGTTCTACGCCAAGGAGTACAGGGAATATCAGACATCATAACAATACCTGGGCTTGTCAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGGACTGCAATGCTTGGAGTTGGTGTGTCCTCCGGTAAAAACCGGGCAGAAGAAGCAGCAGAACAGGCTACTTTGGCTCCTTTAATTGGATCATCTATTCAGTCAGCTACTGGGGTAGTGTATAATATTACTGGAGGAAGAGACATAACCCTGCAGGAAGTGAATCGGGTTTCTCAGGTGGTGACTAGTTTGGCTGATCCTTCTGCTAATATTATATTTGGGGCCGTTGTTGATGATCGCTACACGGGTGAGATTCATGTGACTATCATTGCAACTGGTTTCTCAGAGTCTTTTCAGAAGAAATTGCTAACAGATCCAAGGGCTGCAAAGCTGCTTGACAAAGTGGCTGAGGGCCAACAGAGCAAGGCAGTGCCTCCTCCTCTCAAGTCCTCAAATTCATCTTCCACTGTTCAATCTAGAGCATCCCCGCGAAGGCTCTTTTTTTAG 1254 0.4641 MAMLHPLTNPNELLCSSIYHNAIALTTSVSLNPRTTRIAPQRLTRRYVSVRCSYAYEDNARIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLHSAAENPIKIGEVLTRGLGTGGNPLLGEQAAEESREAIADALKGSDLVFITAGMGGGTGSGAAPVVAQISKETGYLTVGVVTYPFSFEGRKRSLQAYEAIEKLQKNVDTLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGRDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSESFQKKLLTDPRAAKLLDKVAEGQQSKAVPPPLKSSNSSSTVQSRASPRRLFF* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1790 417 MobiDBLite consensus disorder prediction 393 411 - -
Apr9g1790 417 SMART Tubulin_4 61 253 IPR003008 GO:0005525
Apr9g1790 417 Gene3D - 269 376 IPR037103 -
Apr9g1790 417 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 417 IPR045061 GO:0003924|GO:0005525
Apr9g1790 417 SUPERFAMILY Tubulin C-terminal domain-like 255 370 IPR008280 -
Apr9g1790 417 Hamap Cell division protein FtsZ [ftsZ]. 57 387 IPR000158 GO:0003924|GO:0005525
Apr9g1790 417 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 154 160 IPR017975 GO:0005525|GO:0005874|GO:0007017
Apr9g1790 417 Gene3D Tubulin/FtsZ, GTPase domain 52 268 IPR036525 -
Apr9g1790 417 TIGRFAM ftsZ: cell division protein FtsZ 57 373 IPR000158 GO:0003924|GO:0005525
Apr9g1790 417 Pfam Tubulin/FtsZ family, GTPase domain 61 221 IPR003008 GO:0005525
Apr9g1790 417 SMART Tubulin_C_4 255 372 IPR018316 -
Apr9g1790 417 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 417 - -
Apr9g1790 417 PRINTS Cell division protein FtsZ signature 146 166 IPR003008 GO:0005525
Apr9g1790 417 PRINTS Cell division protein FtsZ signature 174 195 IPR003008 GO:0005525
Apr9g1790 417 PRINTS Cell division protein FtsZ signature 237 259 IPR003008 GO:0005525
Apr9g1790 417 PRINTS Cell division protein FtsZ signature 260 281 IPR003008 GO:0005525
Apr9g1790 417 Pfam FtsZ family, C-terminal domain 270 363 IPR024757 -
Apr9g1790 417 CDD FtsZ_type1 77 362 IPR000158 GO:0003924|GO:0005525
Apr9g1790 417 ProSitePatterns FtsZ protein signature 1. 92 126 IPR020805 GO:0005525
Apr9g1790 417 MobiDBLite consensus disorder prediction 385 417 - -
Apr9g1790 417 ProSitePatterns FtsZ protein signature 2. 145 166 IPR020805 GO:0005525
Apr9g1790 417 SUPERFAMILY Tubulin nucleotide-binding domain-like 60 256 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1790 Apr-Chr9 26864912 26867830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1790 K03531 - gmx:100808722 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1790 9 26864912 26867830 Apr9g1790 9 26864912 26867830 ECH