Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1786 ATGGAGGACGTTCCCGATCCCCAACCGGAGGAGACTTCGCCGGTTCAGAATGGCGAGCCTGCGGATTTGGACGAGCGTTGCTCCAAGAAGCCGAAGGTGGAGTCTAAGGTCGACGACGGCGAATTGAAGCGAGTGGCGGAGATTGTGCTGGTGTTGTCCACGATGGCCACGATGCGAGCGGGTAGGAAGCCCACCGATGCCGAGGTTGAACTCATGAAGGAGGCTCGCGCCAAGCTCGCTAGCCTCTGTGAGGGTTTCGCTCCCAAGGATATTGTCGCCACCGAAGCTATTGGCACTGTCATTGAGGATCTCGGTTTGAATTCCAAGCTTAAGGACCAGCGGTTAGGGTTTCGAACCCCTAAGATGTCCATTGCCGAGAGGTATTCTCACGCTAAGTGGAAGATGGAGGAAGCAAAGAAGTTTTCTGCATCATCTACACCTTCTGCGACCCAGCCCTTGCAAACAAGCATTGGTGGAACAGTGGACAATCGTGGTGCATCACAAGGTGTTCGAATGTTTCCACCTGATAAATCTAGTCATCCGATAATGTCTTCTACAGGTACCGTAGTGTCTGTTCCTGTCCATGTTTCTGCTGGATCTTCTGCAACACTGCAATTCCAACCAACTGGGCATGAAGTAAGACCTCCTGTTGGTGTTTCTGGTGTAATGCCTAGCAGTCATTTAGGGAGAAATGCATCTTCCTTAGCATTGCCTAAAGTTGAACACCCACAGTTCAAAGTTGATGGAGGATCAAATGGGTCTTCTTATGTTTTGCAAGTCCAAGCAAATTCTTCAACAAACCAACCTTTGGTGAATGCTCCAACATGGTCAATACAGACTCAAGCTGCTTCATTACCTAGGAGCGCATCAGAAACCAAGGTGCCTGCTCATAACTCTCTCAAGGTTGAAGGAACACCTGATGTAACTGTATCAAGGGCAGGGCCACAAATAACCACAGATCAGAGCTTTAGACCATTTATTACTCAAACAGCCCCTGGAAATTTGCCTAGCCTGCACCAGCCTTTGCACGCCACAAACATTGTTCAGCCTCCTTTGATTCCTAGTCATGCTGATATTGCAAAGATTGTCCAGAAAGTGTTACAACCAAAGCTTCCTGACCGTCCCACATGGACTCCTCCATCAAGGGATTATATGAATAAGGCTTTGACATGTCAGATGTGTGAGCTCACTGTAAATGAGGTTGATAGTGTACTTCTCTGTGATGCTTGTGAAAGGGGATATCACTTGAAATGTCTACAGTCATCGGTCTTTAGAGTAATTCATAATAGAGCTGATTGGCACTGCACGAGGTGCTTGAGTTCAAGTGGTGGAAAACCTTTGCCTCCTAAATATGGTCGTGTCATGAGATCCTCTAGCACACCACCAAAATTGCCCTCTAATACAGGTGGTATTCAATCATGTTCTGAGAAGAAGCCAGAGAACTTAGATCCAAAGGTCTGCCTGCAGACTTTTATGACTAATGGGAGCTCAGTTCCAACTATTTCCAGTGGCAATCACAATGTTGAGCTGCCATCTGACTCAAAAATCCCAGATACAAAAGATATGCAAGGGACTGGCATTTCATCCAGCATTGAAGCTATTGATAAGACACCTGATCCAAACAACTCTATGAAACCCCTTAGTACAGCTTCTAGTCCTTCCACTGGCTTGCTGTGCGAAAGCTCTGCACAACAACTAAATTCCAAGGTTTTGAACTTTAAAGAGACTTCAGAATCTGAGTCTCTTCCTAAATCATCTGAGCCAGCTAAATGTGAAAATTTGCAATCATCACAAGATTTTCAAGTTGAACAGAGAGTGTCACAAGAAGGTACTGGAGTATCATCAGATAAACATGTTGACAGTAACATGAATAAACAAAAGGAATCTAGAGGAGAAAATTTAACTTATAATATCAAACGGGATGACAAAGATGCTGTGCTCACAAATTTTGTTGGAACTTCTGGAAATAATACTGAAGGTAGACAGCAGTCTGCATTACCTTCAGATAGTTCACATGCTGTAGAATGGATTGGTGATGTACAAATTGTAGATGAGAAAAAGTTTTACCAATCTTGCCGAGTTGATGGAGTAACATATAGGCTGCAGCATCATGCTCTTTTCCCCACCAGCCATGGCAAATTAACTCCTTCTAAACTCCAGTCGATGTGGGAAGATTGCAAAACTGGTTTAAAGTGGGTTCAGGTGACAAAGTGCTATTTTCCCAATGATTTGCCAGGGAGTATTAGTCATCCGTGTATATCTGAAGTCAATGAGGTTTATGAATCTAATAGTAACAGCACTGAAATGGCTAGCTCTATTCGAGGCCCATGTGAAGTCCTTCCATCTGGTAAATTTAAACAAGAAAATGACAGGCGATGTCAGTTAGGAATTGAGGCAAGTGCTGAAATGCAGCCCATTTTCCTTTGCAGGTGGTTTTATGATGAAGTCAAAAGCTTATTTCAACCTGTAACCAGTTGA 2478 0.4431 MEDVPDPQPEETSPVQNGEPADLDERCSKKPKVESKVDDGELKRVAEIVLVLSTMATMRAGRKPTDAEVELMKEARAKLASLCEGFAPKDIVATEAIGTVIEDLGLNSKLKDQRLGFRTPKMSIAERYSHAKWKMEEAKKFSASSTPSATQPLQTSIGGTVDNRGASQGVRMFPPDKSSHPIMSSTGTVVSVPVHVSAGSSATLQFQPTGHEVRPPVGVSGVMPSSHLGRNASSLALPKVEHPQFKVDGGSNGSSYVLQVQANSSTNQPLVNAPTWSIQTQAASLPRSASETKVPAHNSLKVEGTPDVTVSRAGPQITTDQSFRPFITQTAPGNLPSLHQPLHATNIVQPPLIPSHADIAKIVQKVLQPKLPDRPTWTPPSRDYMNKALTCQMCELTVNEVDSVLLCDACERGYHLKCLQSSVFRVIHNRADWHCTRCLSSSGGKPLPPKYGRVMRSSSTPPKLPSNTGGIQSCSEKKPENLDPKVCLQTFMTNGSSVPTISSGNHNVELPSDSKIPDTKDMQGTGISSSIEAIDKTPDPNNSMKPLSTASSPSTGLLCESSAQQLNSKVLNFKETSESESLPKSSEPAKCENLQSSQDFQVEQRVSQEGTGVSSDKHVDSNMNKQKESRGENLTYNIKRDDKDAVLTNFVGTSGNNTEGRQQSALPSDSSHAVEWIGDVQIVDEKKFYQSCRVDGVTYRLQHHALFPTSHGKLTPSKLQSMWEDCKTGLKWVQVTKCYFPNDLPGSISHPCISEVNEVYESNSNSTEMASSIRGPCEVLPSGKFKQENDRRCQLGIEASAEMQPIFLCRWFYDEVKSLFQPVTS* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1786 825 SMART PHD_3 390 439 IPR001965 -
Apr9g1786 825 MobiDBLite consensus disorder prediction 498 558 - -
Apr9g1786 825 CDD BAH 696 824 - -
Apr9g1786 825 SUPERFAMILY FYVE/PHD zinc finger 381 448 IPR011011 -
Apr9g1786 825 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 380 455 IPR013083 -
Apr9g1786 825 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 7 824 - -
Apr9g1786 825 MobiDBLite consensus disorder prediction 1 38 - -
Apr9g1786 825 Gene3D - 675 825 IPR043151 -
Apr9g1786 825 MobiDBLite consensus disorder prediction 573 619 - -
Apr9g1786 825 ProSitePatterns Zinc finger PHD-type signature. 391 438 IPR019786 -
Apr9g1786 825 ProSiteProfiles BAH domain profile. 697 824 IPR001025 GO:0003682
Apr9g1786 825 MobiDBLite consensus disorder prediction 449 478 - -
Apr9g1786 825 MobiDBLite consensus disorder prediction 22 38 - -
Apr9g1786 825 ProSiteProfiles Zinc finger PHD-type profile. 388 441 IPR019787 -
Apr9g1786 825 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 7 824 - -
Apr9g1786 825 MobiDBLite consensus disorder prediction 620 635 - -
Apr9g1786 825 MobiDBLite consensus disorder prediction 573 635 - -
Apr9g1786 825 MobiDBLite consensus disorder prediction 459 475 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1786 - - gmx:100807139 1321.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1786 9 26841340 26848723 Apr9g1786 9 26841340 26848723 ECH