Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1784 ATGGCGAGCGAGAACGAACCCGCGAAGCTGCTTTTACCATACCTTCAACGCGCCGATGAATTGCAAAAGCACGAACCTCTCGTCGCTTATTACTGTCGATTATATGCGATGGATCGGGGGTTGAAGATTCCACAAAATGAGCGCACCAAGACCACTAATGCTCTTCTCGTTTCGCTCATGAAGCAGCTTGAAAAGGATAAAAAGTCAATCCAGTTGGGGCCTGAAGACAATTTATATCTCGAGGGATTTGCTTTGAATGTGTTCGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGGGCTGATTTGAATACGGCAAAAACATTTTATGCTGCTAGCATCTTTTTTGAGATTCTTAATCAATTTGGAGTGATTCAGCCTGATCTGGAGCAGAAACAGAAATATGCGGCATGGAAAGCAGCTGATATAAGAAAAGCTTTGAAAGAAGGAAGGAAGCCCACAGCTGGCCCCCCCTATGATGATGAAGATCTGTCAGTTCCATTGAGTGCTTCAAGTATTAGATATGACCTAGAAACTACTGAAACCACCGTTACCAGTCCTGGACCAGAATCTGATTCATCACATAGTTATCATAACCCTGCCAACTATCAGAATCTGCCCAGCACTCATCCTGCACCTAAATTTCATGATACTGTTAACGACCAACATTCTGGAAACATTCCACCATCTATGCCGTTTCATGATAGAGTAGATAATAACCAGCATCCGTCCATTGTTTCTCCATCAGCTCACTCTTACACACCTGCAGTTTATCCTTCACAAGATTACCATCCTCCTCCACCTTCACAAGATTATCATTCTCCTCCACCTTCACAAGATTACCATCCTCCTCCACCTTCACAAGATTATCATTCTCCTCCACCTTCGCAAGATTATCATCCTCCTCCACCTTCCCAAGATTACCATCCTCCTCCACCTTCCCAAGATTACCATCCTCCACCTGCCAGATCAGAAAGTTCTTATCCTGATCCTTACAGCCATCAGCAATTCTCACCAGATCACTCACAGCATTTAGGTCCTAACTACCCTTCTCAGGAAACTTCCTCTTATTCTTACCCCCATTTTCAGTCATATCCAAGTTTTACGGAAAGCAGCCTTCCATCTGTCCCATCAAACTATACTTATTATCAAGGGTCTGATGCTTCCTATTCTTCCCAGTCAGCTCCGCTGACTACAAACCATTTATCAAGTGTTCAACACAGTTCCAGTAGCAGAAATGGAACTGTCGTGGAACCTAAGTCAATTACTCAGACATACCAGTATGACAGTAACTACCAGCCAGCACCTGAAAAAATAGCAGAAGCACACAAGGCTGCAAGGTTTGCTGTTGGGGCACTGGCATTTGATGATGTCTCAATTGCAGTAGACTACTTGAAGAAATCACTTGAGTTGCTGACAAATCCATCTGCTGGCCAGTGA 1437 0.4405 MASENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMDRGLKIPQNERTKTTNALLVSLMKQLEKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGVIQPDLEQKQKYAAWKAADIRKALKEGRKPTAGPPYDDEDLSVPLSASSIRYDLETTETTVTSPGPESDSSHSYHNPANYQNLPSTHPAPKFHDTVNDQHSGNIPPSMPFHDRVDNNQHPSIVSPSAHSYTPAVYPSQDYHPPPPSQDYHSPPPSQDYHPPPPSQDYHSPPPSQDYHPPPPSQDYHPPPPSQDYHPPPARSESSYPDPYSHQQFSPDHSQHLGPNYPSQETSSYSYPHFQSYPSFTESSLPSVPSNYTYYQGSDASYSSQSAPLTTNHLSSVQHSSSSRNGTVVEPKSITQTYQYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSAGQ* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1784 478 MobiDBLite consensus disorder prediction 386 417 - -
Apr9g1784 478 MobiDBLite consensus disorder prediction 239 255 - -
Apr9g1784 478 Pfam Vta1 like 13 148 IPR039431 -
Apr9g1784 478 MobiDBLite consensus disorder prediction 178 210 - -
Apr9g1784 478 MobiDBLite consensus disorder prediction 178 357 - -
Apr9g1784 478 Gene3D - 3 152 IPR023175 -
Apr9g1784 478 Pfam Vta1 C-terminal domain 435 472 IPR041212 -
Apr9g1784 478 MobiDBLite consensus disorder prediction 259 318 - -
Apr9g1784 478 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 314 IPR044538 GO:0032511
Apr9g1784 478 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 298 476 IPR044538 GO:0032511
Apr9g1784 478 MobiDBLite consensus disorder prediction 327 357 - -
Apr9g1784 478 Gene3D Immunoglobulin FC, subunit C 434 473 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1784 1 118 Glycosyltransferase AT2G31960 25.984 2.04e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1784 K12199 - gmx:100783739 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1784 9 26824230 26827481 Apr9g1784 9 26824230 26827481 ECH