Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1783 ATGGCGGTGACAGAAGATCAAAATCCTCTTCTTGGAGAAAACACCTGTGGTTCCTTGTTAAAGAAGCTGCAGGAAATATGGGATGAGGTTGGTGAGAGCGATGAGCAACGAGACAAGATGCTTCTTCAGTTAGAGCAGGAGTGCTTGGATGTGTACAAGAGAAAGGTTGAGCAGGCTGCAAAGTCAAGGGCACAGCTACTTCAAGCCTTGTCTGATGCTAAGCTGGAGCTTTCTGGTCTTCTATCAGCTCTTGGAGAAAAGAGCTTTGCTGGAATTCCTGAGAACACATCTGGAACTATCAAGGAACAGCTCGCAGCCATAGCACCAGTACTGGACCAATTATGGCAACAAAAGGAAGAAAGAATTAAGGAGTTCTCAGATGTGCAGTCACAGATCCAACAAATATGTGGAGAGATAGCCGGGAACTTGAACCTTAATGATGTTTCACCTGCAGTTGATGAGTCTGATCTATCCCTGAAGAGGTTAGATGAATATCAGTCCGAGCTCCAAGAACTTCAAAAAGAAAAGAGTGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGTACTGTGCATGATCTATGCGCTGTCCTTGGTATGGACTTCTTCAGTACTGTAACTGAGGTTCATCCAAGCCTAAATGATTCTACTGGTGTTCAATCCAAAAGCATAAGTAACGACACCCTAGCTAGGCTGGCTAAGACAGTCTTAACGCTGAAAGAAGATAAAAAGCATAGGCTGCACAAGCTCCAAGAATTAGCTTCTCAGTTAATTGATCTGTGGAATCTAATGGATACCCATCCAGAGGAAAGGAGACTTTTTGACCATGTTACCTGTAATATGTCAGCTTCTGTTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATTTAATTGAGCAGGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAGGAAATTGCTTTCAAGAAGCAAGCAGAACTTGAAGATATATTTGCCCGTGCTCATATAGAAATAGATCCGGATGCTGCCCGAGAGAAGATCATGACATTGATTGATTCAGGAAACATTGAACCAGCTGAATTGCTGGCTGACATGGACAATCAGATAGCAAAAGCAAAAGAAGAAGCTTTAAGCCGAAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAAAACAGATATAATGCAAGCAGAGGTGCACACTTAAACCTCAAGCGGGCGGAGAAAGCTCGGATATTGGTCAACAAAATTCCAGCTTTGGTCGATACATTGGTTGCTAAAACCCGTGCATGGGAAGAAGATCATGGCATGTCATTTGCATATGATGGTGTTCCTCTTCTTGCCATGTTAGATGAATATGCCATGCTCAGACATGAACGGGAAGAGGAAAAACGGAGGATGAGGGATCAGAAGAAGCACCATGAGCAACGAAACACAGAACAAGAAGTCATCTATGGTTCAAGACCCAGCCCTGCTAGGCCAGCTAGTTCCAATAAGGTAGGAGGTCCTCGAGCTAATGGAGGAGCCAATGGTACTCCTAACCGACGGCTATCTCTCAATGCTCATCAAAATGGAAGCAGGTCCATATCAAAAGATGGAAAAAGGGATAATATAAGACCAGTTGCTCCCGTGAACTACGTGGCCATATCAAAAGAAGATGCTGCTTCCCATGTTTCTGGCACTGAACCCATCCCGGCATCACCCTAA 1752 0.4418 MAVTEDQNPLLGENTCGSLLKKLQEIWDEVGESDEQRDKMLLQLEQECLDVYKRKVEQAAKSRAQLLQALSDAKLELSGLLSALGEKSFAGIPENTSGTIKEQLAAIAPVLDQLWQQKEERIKEFSDVQSQIQQICGEIAGNLNLNDVSPAVDESDLSLKRLDEYQSELQELQKEKSERLHKVLEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLTLKEDKKHRLHKLQELASQLIDLWNLMDTHPEERRLFDHVTCNMSASVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQAELEDIFARAHIEIDPDAAREKIMTLIDSGNIEPAELLADMDNQIAKAKEEALSRKDILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEDHGMSFAYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKHHEQRNTEQEVIYGSRPSPARPASSNKVGGPRANGGANGTPNRRLSLNAHQNGSRSISKDGKRDNIRPVAPVNYVAISKEDAASHVSGTEPIPASP* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1783 583 Coils Coil 461 492 - -
Apr9g1783 583 Coils Coil 155 182 - -
Apr9g1783 583 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 4 583 IPR007145 GO:0000226|GO:0008017
Apr9g1783 583 MobiDBLite consensus disorder prediction 526 542 - -
Apr9g1783 583 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Apr9g1783 583 Gene3D - 368 502 - -
Apr9g1783 583 MobiDBLite consensus disorder prediction 476 554 - -
Apr9g1783 583 MobiDBLite consensus disorder prediction 476 496 - -
Apr9g1783 583 PANTHER MICROTUBULE-ASSOCIATED PROTEIN, MAP65/ASE1/PRC1-RELATED 4 583 - -
Apr9g1783 583 Coils Coil 298 318 - -
Apr9g1783 583 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1783 Apr-Chr9 26818692 26822552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1783 13 548 EF-hand Containing Proteins AT5G62250 41.241 1.80e-122 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1783 K16732 - gmx:100806071 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1783 9 26818692 26822552 Apr9g1783 9 26818692 26822552 ECH
Apr2g0233 2 2931500 2936369 Apr9g1783 9 26818692 26822552 PCT