Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1782 ATGAGAGATATACATACGGATCATAACTGTAATTCACCAAGAACGCCAAATGTTCGGCTAAGAAGACGCTCAAATGAGATTCCTCCTGAGATAAGCAAATCAAATGGAAACTATTTACTTGTGGATGATAAATGTAAATACAGATCAATGTGGATCCGTGCATACTCCTCTCTGTGGATGCTAGCAAGTGTCTCACTGATCATATACTTGGGTCATCTTTACATTTGGGCTATGGTTGTTGTTATCCAAATATTTATGGCCAGTGAGCTCTTCAATCTACTGAAAAGAGCTACTCAACATAAACGTCTCCCTAAGTTTAAGCGATTGAACTGGCATTTTTTCTTCACAGCAATGCTATTCGTTTATGGCCGCATTCTCAGACAACAACTTGTGAATACAGTGACCTCAGATAAATTCTTCTATAGACTTGTGAGCAACCTGATCAAGTATCAGATGGTTATATGTTACTTTTTATACATTGCAGGCTTTGTATGGTTTATCCTTTCATTAAGGAAGAGATACTACAAATATCAGTTTGGCCAGTATGCATGGACACATATGATACTTATTGTTGTGTTTACTCAGTCTGCATTTACTGTAGCCAATATATTTGAAGGGATTTTCTGGTTTCTTTTCCCTGCATCCCTTATTGCTATGAATGATGTTGCTGCATATGTCTTCGGTTTCTTTTTTGGGAGAACACCTCTGATCAAGCTTTCCCCAAAGAAAACATGGGAAGGATTCATCGGAGCATCCGTTGCCACTATGATTGCTGCATTTACGTTTGCAAACTTCTTGGGTCACTTCCAGTGGCTAACATGTCCAAGGAAGGATTTATCAACTGGTTGGCTTCAGTGTGACCCTGACCCAATATTTAAGCCAGAGTTCATTCCATTGCCAGGATTTATTTCTCATTGGCTTACTTGGAAAGAGATTGCAGTTTTGCCAGTGCAGTGGCATGCCTTGTGGATGGGATTATTTGCGTCCATCATAGCACCATTTGGAGGTTTTTTCGCTAGTGGATTCAAAAGAGCTTTTAAAATCAAGGACTTTGGGGACAGCATACCTGGACATGGCGGATTTACTGACAGAATGGATTGCCAGATGGTAATGGCTGTTTTTGTCTATATTTACCACCAGTCATTTGTTGTGACCCAAGATTATTCAGTTGAGATGTTTTTGGACCAGATAATGAGGAACCTTGGTTCAGAGGAGCAGCTATCTCTCTACACAAAACTCGGGCAGATATTACAAGAAAGGCGTTTTATTCAGACATGA 1278 0.3983 MRDIHTDHNCNSPRTPNVRLRRRSNEIPPEISKSNGNYLLVDDKCKYRSMWIRAYSSLWMLASVSLIIYLGHLYIWAMVVVIQIFMASELFNLLKRATQHKRLPKFKRLNWHFFFTAMLFVYGRILRQQLVNTVTSDKFFYRLVSNLIKYQMVICYFLYIAGFVWFILSLRKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFEGIFWFLFPASLIAMNDVAAYVFGFFFGRTPLIKLSPKKTWEGFIGASVATMIAAFTFANFLGHFQWLTCPRKDLSTGWLQCDPDPIFKPEFIPLPGFISHWLTWKEIAVLPVQWHALWMGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSFVVTQDYSVEMFLDQIMRNLGSEEQLSLYTKLGQILQERRFIQT* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1782 425 Pfam Cytidylyltransferase family 52 382 - -
Apr9g1782 425 ProSitePatterns Phosphatidate cytidylyltransferase signature. 340 366 IPR000374 GO:0016020|GO:0016772
Apr9g1782 425 PIRSF CDP-DAG_synth_e 4 425 IPR016720 GO:0004605
Apr9g1782 425 MobiDBLite consensus disorder prediction 1 26 - -
Apr9g1782 425 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 3 6 423 - -
Apr9g1782 425 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 6 423 IPR016720 GO:0004605
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1782 Apr-Chr9 26809821 26813994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1782 2 420 Lipid Metabolism Gene Families AT4G26770 73.550 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1782 K00981 - gmx:100805363 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1782 9 26809821 26813994 Apr9g1782 9 26809821 26813994 ECH