Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1781 ATGGCCATGGAGCTGTGTACCCGAACCTTCACAAGGGTCGTCCTTTTCAAACCTTCTTTCTCACACCCCACTTCAAACCCTCTCCTTCTTCGTGCCAACACTGCACCCTTCAAATTCACTTCCTTCAATCTCTCATCATCTTTTATCCCTCATCATGTTCACCTCTTTCAACACACTTCTTCTCCATTCCCACTCGCAGCTTCTTCTTCTTCTTCTTCAGTCGCACTTGGAGAAGAAAAGGACCGTCTTCCTGCTGAATTGAAGGTCACTGAAACAGAGGAATCCAACTCCAGAGTTAGATTGCACGTGGAGGTGCCACCATTGGTATGTGAGGACTGTTACAAAAGGGTCATAGCAGAGTTTATGAAGCATGCAAAGGTTCCTGGATTTCGCCCTGGAAAGAAAGTTCCAGAAAGTATTCTTGTTAGTTATGTTGGGAGTAAAAATGTTCAGAAGGCTACAATTGAATCTATATTGAGGAGGACACTTTCCCATGCTATGACATCGGTTACTGGAAGGGCTTTGCAAGACTCTGTACGTATAATGACTAAGTTTTCTGAGATGGAGGAGACATATTCTTCTAATGGGTCTCTTAGATATCATGTTATTGTTGATGTTGCACCAGAAATCAAATGGATTCCTGATAATAATGCCTACAAAAATTTGAAGATTTTTGTTGAGATAGAGAGTGATATAGACGCCCACAGAGCATCTGAACAAGAATTCAGAAGGCGGTACAAGTCCATTGGTTCACTGAAAGTAGTTACTAACAGAGGGCTACAGGTTGGTGATGTTGCTGTCGTTGACATCTCAGCAACAACCATTGATCAAGATGAATCAAATGTTAAAAATATTTCTTCTGCTGAAAGTAAAGGTTTTAATTTTGATACAGAAGATGGTGACAAATTATTACCGGGTTTCCTGGATTCTATAATTGGAATTTGTCGTGGTGAAACAAAGTCCTTTCCTCTTGTATTTCCTGAAACATGGAAGCAAGAAAATCTTCGTGGTGTTCATGCTCAGTTTACTGTTGAATGCAAAGAACTTTTTTACAGAGATTTACCAGAGCTGGATGATTCTCTTGCTGATAAGCTTCTCCCGGGATGCACCACTGTGGAACAGGTCAAAGACTTGTTGTTACAGAGATACCTTGAGGTGGAGCAAACAGCTAGAGAACAAGCAGCTGACAATACTATCTTAGATCAGATTTCTAAGATGGTAGAAGTGGATATACCTCAATCCCTGTTTGAGGAGCAAGGTAGGCAGCTTTATGGGGCCAACCTATTAGAAATACAGGCAAAAATGCAACTAAATGAGCAGCAGCTGGCATCTCTATCAAGTCCAAAGGCTGTCAATGAATATCTTGAGCATCAGAAGGAAAATATAACAAACTTGATAAAACAGAATCTGGCAGTTGGTGATATATATAGGCGTGAAAATCTGCAGTTTTCTACTGAGGACCTTGTCAAAGAGGTTGAGAATTCCATTGCCGAATTCAAACTTCAAAATCAAGAATATGACGAGGAACGGGTGAAGGAACAGGTTCAAGAAATACTGGAAGGAGCTAAGGTGCTTGAATGGTTGAGAGAACATGCAGAGATTCAGTATATAACTAGGTGA 1620 0.408 MAMELCTRTFTRVVLFKPSFSHPTSNPLLLRANTAPFKFTSFNLSSSFIPHHVHLFQHTSSPFPLAASSSSSSVALGEEKDRLPAELKVTETEESNSRVRLHVEVPPLVCEDCYKRVIAEFMKHAKVPGFRPGKKVPESILVSYVGSKNVQKATIESILRRTLSHAMTSVTGRALQDSVRIMTKFSEMEETYSSNGSLRYHVIVDVAPEIKWIPDNNAYKNLKIFVEIESDIDAHRASEQEFRRRYKSIGSLKVVTNRGLQVGDVAVVDISATTIDQDESNVKNISSAESKGFNFDTEDGDKLLPGFLDSIIGICRGETKSFPLVFPETWKQENLRGVHAQFTVECKELFYRDLPELDDSLADKLLPGCTTVEQVKDLLLQRYLEVEQTAREQAADNTILDQISKMVEVDIPQSLFEEQGRQLYGANLLEIQAKMQLNEQQLASLSSPKAVNEYLEHQKENITNLIKQNLAVGDIYRRENLQFSTEDLVKEVENSIAEFKLQNQEYDEERVKEQVQEILEGAKVLEWLREHAEIQYITR* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1781 539 Gene3D - 220 534 IPR037041 GO:0006457|GO:0015031
Apr9g1781 539 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 71 538 IPR005215 GO:0015031
Apr9g1781 539 Gene3D - 85 212 IPR036611 GO:0006457|GO:0015031
Apr9g1781 539 Gene3D - 248 355 IPR046357 GO:0003755
Apr9g1781 539 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 357 535 IPR027304 -
Apr9g1781 539 Hamap Trigger factor [tig]. 87 535 IPR005215 GO:0015031
Apr9g1781 539 SUPERFAMILY Trigger factor ribosome-binding domain 87 215 IPR036611 GO:0006457|GO:0015031
Apr9g1781 539 Pfam Bacterial trigger factor protein (TF) C-terminus 371 528 IPR008880 GO:0006457|GO:0015031
Apr9g1781 539 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 71 538 - -
Apr9g1781 539 SUPERFAMILY FKBP-like 254 358 - -
Apr9g1781 539 Pfam Bacterial trigger factor protein (TF) 88 226 IPR008881 GO:0006457|GO:0015031
Apr9g1781 539 Coils Coil 489 509 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1781 K03545 - gmx:100812597 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1781 9 26803633 26809507 Apr9g1781 9 26803633 26809507 ECH