Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1768 ATGAAGAAAGACAAAGTTCAAAACAACACTCCGTCTTTGACACTATGCATTGCTTTACTCTCTCTCACCACAATCTTCCTTCCTTTATGTGAGTCCTTCAACTATGGCCAAGCCCTCTCCCAGAGCCTCCTTTACTTTGAATCTCAGCGTTCAGGTCGCTTACCCCACAACCAAAGGGTCACTTGGCGTCACCATTCTGCCCTCACTGATGGTCTAGAACAAGGGGTGGACTTGGTGGGAGGTTACTATGATGCTGGGGATAACGTTAAGTTTGGGCTTCCAATGGCATTTACCATAACACTCCTCTCATGGGCTGTCTTAGAATACGGGGAACAAATCGCTGGTGCCGGCGAGTATTCTCACGCGCTGGAGGCCATCAAGTGGGGCACCGATTATTTCATCAAGGCCCACACACGACCAAATGTTCTTTGGGTTGAGGTGGGTGACGGCGATACTGATCACTACTGTTGGCAGCGGCCGGAGGACATGACGACGTCACGGCGAGCTTATAGGATTGACCGGAACCAGCCCGGCTCCGATGTCGCCGGCGAGACGGCGGCAGCGTTGGCAGCGGCATCCATTTTGTTTAGGAGAACAAACCCACATTACTCTCAACTACTTTTGCACCATGCGCAACAGTTGTTTGAGTTTGGTGACAAGTTTAAGGGGAAATATGATGAGAGTGTTGGAGTGGCTAAAGGATATTATACTTCGGTTAGTGGGTACATGGATGAGTTACTTTGGGCAGCGATTTGGCTTTATAGGGCCACCGAAAAGGAAGAATATTTGAACTATTTTTTGGACAAAGCTTATGACTTTGGTGGGACCACTTGGGCCATGACTGAATTCAGCTGGGATGTCAAGTACGCAGGTCTTCAAGCCATTGCTTCTATGCTTCTCATGGAGGAGAAGCACAAGAAACACGAAGTCATACTCAAACAGTATCGTTCAAAAGCCGAACACTACCTCTGCGCGTGTCTCAACCTCAACAACGTTACTAACGTGCAGCGCACCCCAGGAGGGTTACTGTATGTCCGCCAATGGAACAACATGCAATATGTCGCAACGGCGTCGTTTCTTCTCACAGTGTACTCTGATCATCTCTTAGCCACAGGTCAGAAGCTTAATTGCCAAAAAGGGGAAGCGGGTTCCAATGAGTTATTTGCCTTTGCAAAATCACAAGTTGATTACATCTTGGGTTCTAATCCAATGGGTATGAGCTACATAGTAGGCCACGGATCCAATTTCCCCCGGAGGGTGCACCATAGGGGTGCATCCATTGAATCATACAATGGGAACAAGGGTTTTATTGGGTGCACTCAGGGTTATGATAACTGGTATGGACGGCCCGGGCCCAATCCCAATGTACTCATTGGGGCCCTCGTTGGTGGGCCTGACATAATGGACCAGTTTAAAGATGACAGGAGCAATTACATGCAGACAGAGGCTTGTACATACAATACGGCGGCACTTGTAGGGGTTTTTGCTAGATTGTATGGATCCGAAGGTGATGTTTATAACAATGAACCATCTTTGGTAGCTTCTAGCTAA 1551 0.481 MKKDKVQNNTPSLTLCIALLSLTTIFLPLCESFNYGQALSQSLLYFESQRSGRLPHNQRVTWRHHSALTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITLLSWAVLEYGEQIAGAGEYSHALEAIKWGTDYFIKAHTRPNVLWVEVGDGDTDHYCWQRPEDMTTSRRAYRIDRNQPGSDVAGETAAALAAASILFRRTNPHYSQLLLHHAQQLFEFGDKFKGKYDESVGVAKGYYTSVSGYMDELLWAAIWLYRATEKEEYLNYFLDKAYDFGGTTWAMTEFSWDVKYAGLQAIASMLLMEEKHKKHEVILKQYRSKAEHYLCACLNLNNVTNVQRTPGGLLYVRQWNNMQYVATASFLLTVYSDHLLATGQKLNCQKGEAGSNELFAFAKSQVDYILGSNPMGMSYIVGHGSNFPRRVHHRGASIESYNGNKGFIGCTQGYDNWYGRPGPNPNVLIGALVGGPDIMDQFKDDRSNYMQTEACTYNTAALVGVFARLYGSEGDVYNNEPSLVASS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1768 516 Gene3D - 31 501 IPR012341 GO:0005975
Apr9g1768 516 PANTHER ENDOGLUCANASE 8 504 - -
Apr9g1768 516 SUPERFAMILY Six-hairpin glycosidases 32 503 IPR008928 GO:0005975
Apr9g1768 516 Pfam Glycosyl hydrolase family 9 35 494 IPR001701 GO:0004553|GO:0005975
Apr9g1768 516 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 397 423 IPR018221 -
Apr9g1768 516 PANTHER ENDO-1,4-BETA-GLUCANASE 8 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1768 Apr-Chr9 26700248 26702654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1768 19 497 Glycoside Hydrolase AT2G32990 72.802 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1768 - - gmx:100786912 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1768 9 26700248 26702654 Apr9g1768 9 26700248 26702654 ECH