Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1753 ATGGACGAGCCCACTTTTGTGTCGAAAGCAAGGATCGCCTTCCATTCCGCGGCTGCGAAAGCGGAGCGTGTTCTCATGGACTTCAAATCTGATCGAGAAGATCACGATAAGCGATCGCCCAGCAGCTTGACCAGGCAATCGGAAATTGAATCTCCTCACAACGAGAACGAGTCGAAGCTTCGCAGTGAATTGAAGCATATAAAGTGGAGGCCTCCACATATAGGAATAAAGCAGGATTGGCAAGATAGAATTAAGAACATTCGGATAGGGAGAAAAGAAGTTGAAAATCAAAATACAGATAAAGTTGGGGATGCAAACATGGCAATTCATTTTTATGATGAAAATTTGTACATTCTGAATATGAAGAATGATCTTGAGGCCAAGGCTTCGGATACAATTCCCTCAGTTGAAGGCCTAACTGATGCAACTAAACATCCCATTCCTCCGTCATCTGTGCTGAAACAATTGGCAATAGCTGTCGAGGCTGGAAGTAAAACAAAGTCGATGAAAGATTTTCTAGCTTCATCAGCAGGTTCTTCGCCTGCCAAAGAGAGGGCAGGCTTAAGTCTCTCTGCTGTTAGGGCTTTAGTGCTGCGTGAAAAGGCGGACAAACTTACCTCTGAGTTTAGTAGCGATGAAAGAGTTGTACATTTGATTAATACTCTGTTTGATCCAGAGGGAGATTTCCTTAGAAGGAAGATCAACTCTAATCCAGAGGAAACTGCCATGACATCTTTGCCAAGAGATATTCATGGTTCTCCTCCCGAAAGCCTTGTTGTTAAGCTAGCTGAAATCATTGGAAACTACAAGTCTCTTCGAAAAATGGCACTTTTCTGGCACAGAGTTGTTGCTGAACTAAGAAAACATTGGTCTGAGGATCAACACTTGCCTGGAGTCCCCCAGCATGAGATTCCAGATCTGAAGTCATGTCTTCTGTATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAACGCTCCGTTTTATTGCCACTGAATCTCTAGACTCTATGATGATGCAAGCTAATTCAAACAGAAAAGAATCAACTGATTCTTATGGTGAAGCTCCTGCTACCCCTGTTCTATATGCTAGGGTAAATAGTGGGGAGCTTGTTCTTCGACTTGGTGCAGATTACCCAGCTGGAGATGTGACATTGTTGGAAACTGGCGAGCCTGTGTATTCTCCCGTTACCCAGGAAGGACCTTTGCTTACAGAAGATCTAATCAAGGAAACAGAGGAGTTTGTGCTGAGGACTGGGAGTGTTGGTGCTGGGTGCTCGCAACTGCTCTCAGATATGCAGGCTTTCAAGGCTGCAAATCCCGGGTGTATTTTGGAGGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGATAATGAGGCAAGTATTGAGGATAGTGATTCTTTTGATGGGGGTGAGCCATTGTCTGCCAAAGGTCAGCTAAGTCGGAGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCAGTACCTGCTGTTAAGCAGGCACCTCTCTTTGATGAAGATTTGGCAGTGGAGGGCATCCTCAATGAATTTGAGGACATCAATCCTTCTGAGCTTTTTGGACAGCTGTTTGTTTCTTTACTTGGTTTAGGATTTGCAATTGCTGAACCTATGCTGTCTAGAAATGGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACTTAGTTGCCACATGTCAAAGCAACAAATTAAATGAGAAAGTTGATGATCTTGTTCAGGTATATGAAACAGTGGAGACAATGTTACTGAATCCCGACGAAGCACAAAAGATGATTAAGCAGACAGAAGAATTAACTATGATTACTGGTGAACCAAAGAGCCGGTTTAAGAGCCTAAGCCTTATCTTTGGTGGCAAAGATAAACTGTTGAAAAAGTCTGCCTCAAAAGATCGGATATACGATGAAATAAAGCCTTGTCGGCAATCTATCAAGTTTCATTGA 1989 0.4279 MDEPTFVSKARIAFHSAAAKAERVLMDFKSDREDHDKRSPSSLTRQSEIESPHNENESKLRSELKHIKWRPPHIGIKQDWQDRIKNIRIGRKEVENQNTDKVGDANMAIHFYDENLYILNMKNDLEAKASDTIPSVEGLTDATKHPIPPSSVLKQLAIAVEAGSKTKSMKDFLASSAGSSPAKERAGLSLSAVRALVLREKADKLTSEFSSDERVVHLINTLFDPEGDFLRRKINSNPEETAMTSLPRDIHGSPPESLVVKLAEIIGNYKSLRKMALFWHRVVAELRKHWSEDQHLPGVPQHEIPDLKSCLLYQQFQVINCCISRKTLRFIATESLDSMMMQANSNRKESTDSYGEAPATPVLYARVNSGELVLRLGADYPAGDVTLLETGEPVYSPVTQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASIEDSDSFDGGEPLSAKGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILNEFEDINPSELFGQLFVSLLGLGFAIAEPMLSRNGDFSKLFYDCKEYLVATCQSNKLNEKVDDLVQVYETVETMLLNPDEAQKMIKQTEELTMITGEPKSRFKSLSLIFGGKDKLLKKSASKDRIYDEIKPCRQSIKFH* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1753 662 MobiDBLite consensus disorder prediction 461 480 - -
Apr9g1753 662 Coils Coil 77 97 - -
Apr9g1753 662 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 659 - -
Apr9g1753 662 MobiDBLite consensus disorder prediction 29 58 - -
Apr9g1753 662 MobiDBLite consensus disorder prediction 29 43 - -
Apr9g1753 662 Pfam Rab3 GTPase-activating protein catalytic subunit 375 527 IPR026147 -
Apr9g1753 662 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 659 IPR045700 GO:0005096|GO:0043547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1753 Apr-Chr9 26601515 26609878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1753 K18270 - gmx:100818643 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1753 9 26601515 26609878 Apr9g1753 9 26601515 26609878 ECH
Apr2g0202 2 2594597 2603133 Apr9g1753 9 26601515 26609878 PCT