Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1741 ATGGCGTCGTGGTGCGGTAGTTCGTGCTTCCAGATTCCGGCGATAGACGGCGACGCACTGCGCAACCGGGCTTTATTGGCCGCTGGAATAGGGTGCTTGTCGGCGGTGGCTGGCACCTCCTTCTGGCGTTCCTCGTCATCGTCGAAACGCTCTCTGCCACTCACATGCTTGAGCATTTCTTCTGATGCCCGTATTAAGGAAAGTGTTAAAACTGAAAAGGCCCCTGCAGCTTTGGGACCATATTCTCAAGCAATCAAAGCCAACAACCTTCTATTTGTGTCTGGTGTTCTTGGCCTTGTTCCTGAGACAGGGAAGTTCATATCCGATGATGTTGAAGATCAAACTCAACAGCTTCTCAAAAACATGGGGGAAATCCTTAAAGCTGGTGGTGCAAGCTACTCATCAGTTGTTAAGACAACAATTATGCTGGCTGACTTGAACGACTTTAAGAAAGTAAATGAGATCTATGCTCAATACTTCCCTTCACCTTTTCCCGCTCGATCAACTTATCAAGTAGCTGCCTTGCCATTGAATGCCAAGATTGAAATTGAGTGCATAGCAACTCTGTAA 570 0.4737 MASWCGSSCFQIPAIDGDALRNRALLAAGIGCLSAVAGTSFWRSSSSSKRSLPLTCLSISSDARIKESVKTEKAPAALGPYSQAIKANNLLFVSGVLGLVPETGKFISDDVEDQTQQLLKNMGEILKAGGASYSSVVKTTIMLADLNDFKKVNEIYAQYFPSPFPARSTYQVAALPLNAKIEIECIATL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1741 189 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 67 188 IPR006056 -
Apr9g1741 189 SUPERFAMILY YjgF-like 68 189 IPR035959 -
Apr9g1741 189 CDD YjgF_YER057c_UK114_family 81 187 - -
Apr9g1741 189 PANTHER PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEIN 1 189 - -
Apr9g1741 189 ProSitePatterns Uncharacterized protein family UPF0076 signature. 165 183 IPR019897 -
Apr9g1741 189 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 1 189 IPR006175 -
Apr9g1741 189 Pfam Endoribonuclease L-PSP 72 188 IPR006175 -
Apr9g1741 189 Gene3D - 64 189 IPR035959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1741 Apr-Chr9 26508661 26511163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1741 K09022 - gmx:100527559 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1741 9 26508661 26511163 Apr9g1741 9 26508661 26511163 ECH