Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1724 ATGGATCTTAATTCGATGAAGTCAGTGATCCGTAATTCAATAATATGTGCTGACAAAAACATTGTTAATGAATTCAAGAGCCAAATGAATGATCTGATTTCAAACCGAAATTTTGGGATGAGGGAAGCTGAAGAAGCTAGAATGAAAGGTGGGACACTAAATAGTAATGCTCTGTCTTGGTTACAAGCGGTGGAGAAACTCATCGAAGAGGGAAAAGAGATGCAAAGCAAAAGGAGGGGATGTTTTGTTGGGAAGAATTTATATCGGCGATACGAAGAAATGGTAAAGAGAATGGGAGACCTGAATAACACGACAATTTCCTTCATATTCACCCCAATTCCGGAGATGCAGTACTTCTCTACTACAAATTTGAAGTATTATGAGTCTACAAAAGTGGCCTCACATCAACTTGTGAGGGCACTACGAAATGGTAGTAACTATATAATTGGATTGTATGGAAAGCGAGGATCGGGTAAAACAAAGTTAGTGAAAGCAGAAGGTGAAAAAGCAACCTACTTAAAACTTGTTGATGAAGTTGCTTTTGCCACTGTGTCCCAAAATCCAAGCATAAGAAGGATCCAAGACGAAATTGCTGACTGCATTAGTCTGAAATTGGAGGAAAATAGTGATGCAGGAAGAGCAAGAACAATATGTAAGAGACTTCAAAGTGGGGAAAAAATTCTTGTGATCTTGGATGATGTTAGAGAAAAGCTTGAGCTAGAGGATATAGGTATTCCTCACGTTGGTAATCGAGGCAAATGCAAGATCCTTTTGACCTCACGAAAGCAACAAGTATTAATCTTGATGGAGTGTCAAAGGGAGATTCCTTTGGATCCATTGTCTCAAGAAGAAGCTTGGGAGTTGTTCAAGAAACATTCTGGCATAGATGAAGAAAATGAAGATGAAACCTCATCCGAATCTAATCTACTAAAATTGGCACGTGAAGTTGCTGCTGAATGTGAAGGGTTGCCTGGTAAAATTAAAGAAGTTGGATCTTCCTTGAAAAGAAAACCCATTGAGGAGTGGGAAGCATCTTTAGACAGTATGAGATATTCAAGTGCACAATACCAGATTTTTTTGAGTTTTAGAGGAGAAGATACTCGGTATTCTTTTGCAGGTTTTCTCTATCATACTTTGTGTCGAGAGGGATTCAAGACCTTCATGGATGAAGGGGGTTTGGAGAGTGGAGACCATATTTCAGAATCTCTTATTAAAGCAATTGAAACATCAAGGCTTTCCATTATTGTTTTGTCTGAAAACTATGCAGAATCTTCTTGGTGTCTTGATGAACTTGTTGCTATTCTCGAGTGTAAGAAGACCAAGAATCAACTTGTTTGGCCAATTTTTTACAAAGTGGAACCATCAGATGTGAGGTTTCAGAAAAATAGTTATGGCAAAGCCATGGATGCACATGCAATTACGTATGAAAACAACTCTGAGAGGGTGCAGAAATGGAAGTCAGCTTTGTTTGAAGTTGCTGGCTTCTCTGGATATCATTACAAAACGGGGTACGAACATGAATTTATCCAAAAGATTGTGGATAAGGCCAATGATATTAAAAATCGTTTGTGTTACCAGGTTTTTCTGAGTTTTAGAGGAGAAGATACTCGTTATTCTTTTACAGGTTTTCTCCATCATGGTTTGTGTCGGGAGGGATTCAAGATCTTCATGGATGATGGAGGACTTGAGCGTGGAGACCAGATTTCAGAATCTCTTATAAGAGCAATTGAAGCATCAAGGCTTGCCATTATTGTTTTATCTGAAAACTATGCATTCTCTTCCTGGTGTCTTGACGAACTTGTCACTATTCTTGAGTGTAAGAAGACCAAGAATCAATTAGTTTGGCCAATTTTTTACAAAGTGGATCCATCAGACGTAAGGTATCAGAAAAATAGTTACGGTAAAGCCATGAATGCACATGCAAAGAAGTTTGGTGATGACTCTGAGAGGGTGCAGAAATGGAGGTTAGCTTTGTCTGAAGTAGCTGGCCTGTCAGGAGATCATTACACAACTGGGTACGAACATGAATTTATCCAAATGATCGTGGATAAGGGTTTTTTTTTTTATACCCATGGCTTTTCTTGGGACCCGGATCCGAAGCACCACCTGGTTCAACACAAACACAAGCTCCTTCACCGTGGAGCCCTGAAGATTTCCATGTCGGTAATGCAGGGGAAATTTAAGAGACCCATTTGCCCATCTTGTTCCAAACCCACTCGAACGTGTCTATGCTCCCGAATTCTAACATCGGGTATCCAAAATTCTGTGAACGTAACCATTTTACAGCACGCGCTAGAGCACAAGCACCCGCTTAATTCTACTAGAATCGCTACACTCGGCCTTAAGAATGTCAATGTTGCAACCGTTTCTGACGTTAATTTTGATGCCCGGTTCCTGATTCGGTTGTTGGATCCGAATTCCCAATACCTGCAAAATGGCTTGTTATCTCATCAGTCTTGGGAAATTGAAGAGACCCAGAAGTTGTTTTCTGAGAAAGGTTCTAACTTGATTGATTGTGCTGGAAAATGTGGTTTGGAAAATGATATTGGAGATGTTCTGAATGAGATTCATGCTGAAGTTGTGAATCACGTGAGTAACAATGATGGTGCTGTGGTGAATGATGAAGTTGAGAAAATTCCAATTCGTCCCAGTTGTAATCTAACAAGAGGTGTCCATGAAGAGAGTGGAGAGCCTGCTATTACTGTTTCCATTGGCAAATATGGTGCCATTAGCTCTCTGTCTCATATTTGGATGCCACAATGTCAATCCCCCAAGTTAAGCTTTGACAAGATTTTGGCTTATCCTGAAGCTTGTGAAGCACTATCAAAAGGGTTTTTGGTGAAGAAGCTCCAAAGGAAGCAATTGAATGAGGACAAAGACTTGGAAGAATATGAAGAATTCGAGCTTGAGGTTCGTCCTGGATCAGTACTACTATTTCCCTCTGATAAGGCTATTAAAATTAGTGAACTAGATGCTATTGGTTTTGAGGTGAAGAATTTGATAGTTTTGGATGGGACATGGGCTAAGGCAAAAAGAATTTATAGTGAAAATCCTTGGTTGAACATTTTGCCGCATGTGAAGTTGGAAGTGAATGAGAAGAGCTTATATAGTGAAGTGAGGCATCAGCCTAAGGCTGGTTATTTGTCCACAATTGAGAGCATTGTGTTTGCCTTGAAGGCAGTTGGGGAGAATCATGAGGGTTTGGATGGCCTCTTGGATACTTTTGAGTCCATGGTTGGAGATCAGAGACGATGTAAAGAGGAGAGACTGAACAAACTCTTTTCCAGTTGA 3291 0.4005 MDLNSMKSVIRNSIICADKNIVNEFKSQMNDLISNRNFGMREAEEARMKGGTLNSNALSWLQAVEKLIEEGKEMQSKRRGCFVGKNLYRRYEEMVKRMGDLNNTTISFIFTPIPEMQYFSTTNLKYYESTKVASHQLVRALRNGSNYIIGLYGKRGSGKTKLVKAEGEKATYLKLVDEVAFATVSQNPSIRRIQDEIADCISLKLEENSDAGRARTICKRLQSGEKILVILDDVREKLELEDIGIPHVGNRGKCKILLTSRKQQVLILMECQREIPLDPLSQEEAWELFKKHSGIDEENEDETSSESNLLKLAREVAAECEGLPGKIKEVGSSLKRKPIEEWEASLDSMRYSSAQYQIFLSFRGEDTRYSFAGFLYHTLCREGFKTFMDEGGLESGDHISESLIKAIETSRLSIIVLSENYAESSWCLDELVAILECKKTKNQLVWPIFYKVEPSDVRFQKNSYGKAMDAHAITYENNSERVQKWKSALFEVAGFSGYHYKTGYEHEFIQKIVDKANDIKNRLCYQVFLSFRGEDTRYSFTGFLHHGLCREGFKIFMDDGGLERGDQISESLIRAIEASRLAIIVLSENYAFSSWCLDELVTILECKKTKNQLVWPIFYKVDPSDVRYQKNSYGKAMNAHAKKFGDDSERVQKWRLALSEVAGLSGDHYTTGYEHEFIQMIVDKGFFFYTHGFSWDPDPKHHLVQHKHKLLHRGALKISMSVMQGKFKRPICPSCSKPTRTCLCSRILTSGIQNSVNVTILQHALEHKHPLNSTRIATLGLKNVNVATVSDVNFDARFLIRLLDPNSQYLQNGLLSHQSWEIEETQKLFSEKGSNLIDCAGKCGLENDIGDVLNEIHAEVVNHVSNNDGAVVNDEVEKIPIRPSCNLTRGVHEESGEPAITVSIGKYGAISSLSHIWMPQCQSPKLSFDKILAYPEACEALSKGFLVKKLQRKQLNEDKDLEEYEEFELEVRPGSVLLFPSDKAIKISELDAIGFEVKNLIVLDGTWAKAKRIYSENPWLNILPHVKLEVNEKSLYSEVRHQPKAGYLSTIESIVFALKAVGENHEGLDGLLDTFESMVGDQRRCKEERLNKLFSS* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1724 1096 ProSiteProfiles TIR domain profile. 354 520 IPR000157 GO:0007165
Apr9g1724 1096 Gene3D - 279 358 IPR042197 -
Apr9g1724 1096 PANTHER TMV RESISTANCE PROTEIN N-LIKE 522 680 - -
Apr9g1724 1096 PANTHER TMV RESISTANCE PROTEIN N-LIKE 322 523 - -
Apr9g1724 1096 Gene3D - 359 520 IPR035897 -
Apr9g1724 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 353 IPR027417 -
Apr9g1724 1096 SUPERFAMILY Toll/Interleukin receptor TIR domain 346 498 IPR035897 -
Apr9g1724 1096 SUPERFAMILY Toll/Interleukin receptor TIR domain 521 666 IPR035897 -
Apr9g1724 1096 Pfam TIR domain 525 683 IPR000157 GO:0007165
Apr9g1724 1096 Pfam TIR domain 355 515 IPR000157 GO:0007165
Apr9g1724 1096 SMART DTW_2a 728 1087 IPR005636 -
Apr9g1724 1096 Pfam NB-ARC domain 144 354 IPR002182 GO:0043531
Apr9g1724 1096 SMART till_3 355 495 IPR000157 GO:0007165
Apr9g1724 1096 SMART till_3 524 664 IPR000157 GO:0007165
Apr9g1724 1096 Pfam DTW domain 729 1083 IPR005636 -
Apr9g1724 1096 PANTHER TOLL/INTERLEUKIN-LIKE RECEPTOR-PROTEIN 522 680 - -
Apr9g1724 1096 PANTHER TOLL/INTERLEUKIN-LIKE RECEPTOR-PROTEIN 322 523 - -
Apr9g1724 1096 Gene3D - 115 275 IPR027417 -
Apr9g1724 1096 Gene3D - 521 686 IPR035897 -
Apr9g1724 1096 PRINTS Disease resistance protein signature 148 163 - -
Apr9g1724 1096 PRINTS Disease resistance protein signature 221 235 - -
Apr9g1724 1096 PRINTS Disease resistance protein signature 320 334 - -
Apr9g1724 1096 ProSiteProfiles TIR domain profile. 523 662 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1724 Apr-Chr9 26374454 26386874 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1724 525 684 Miscellaneous Gene Families AT5G44900 35.583 3.78e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1724 - - aprc:113874559 2170.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1724 9 26374454 26386874 Apr9g1724 9 26374454 26386874 ECH