Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1509 ATGGAGAACTTCCCCGTTATCAACTTGGAGAATATCAATGTTATTGGTGGGGAGAGGAAAGCTATCCTACATCAAATTGATAATGCTTGCAAGAACTGGGGGTTTTTCGAGTTGGTGAATCATGGAATACCCCTTGAACTTTTGGACACTGTGGAAAGGTTAACAAAGGAGCATTATAGGAAATGCATGGAGCAGAGGTTCAAGGAGGTAGTGGCAAGCAAGGGGTTAGAGGGTGTTCAACCTGAACAAGTAAAGGACATGGATTGGGAGACCACATTTTTCTTGCGCCACCTCCCAAACTCCAACATCTCTGAAATCCCTGATCTCAGCCAAGAGTACAGGGATGCAATGAAGGAATTTGCGAAGAAGTTAGAGAAACTTGCGGAGGAGTTGCTAGACCTGTTGTGCGAAAATCTTGGGTTAGAGAAAGGGTACCTAAAGAAGGCATTTTATGGATCCAAGGGTCCAAATTTTGGGACAAAGGTGGCAAACTACCCTGAGTGTCCGAAGCCAGAGCTGGTTAAGGGTCTTCGTGCCCATACGGATGCGGGTGGTATTATCCTTCTCTTGCAAGATGATAAGGTCAGTGGCCTTCAGCTTCTCAAGGATGGCCAATGGGTCGATGTCCCTCCAATGCGCCACTCCATTGTTGTTAACCTTGGTGACCAGATTGAGGTAATCACGAATGGAAAATACAAGAGTGTGGAGCATCGTGTGATAGCTCAAACTAATGGGACAAGAATGTCTGTAGCATCATTCTATAACCCTGCCAATGATGCTGTTATCTACCCTGCATCATCATTGTTGGAGACAAAAGCAGAGGAAACCGATGAAGTGTACCCAAAATTTGTGTTTGAGGATTACATGAAGCTCTATGCTACGCTCAAGTTCCAGCCTAAGGAGCCTAGATTTCAAGCCATGAAGGCCGTGAACTCATTCTAA 942 0.4522 MENFPVINLENINVIGGERKAILHQIDNACKNWGFFELVNHGIPLELLDTVERLTKEHYRKCMEQRFKEVVASKGLEGVQPEQVKDMDWETTFFLRHLPNSNISEIPDLSQEYRDAMKEFAKKLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVANYPECPKPELVKGLRAHTDAGGIILLLQDDKVSGLQLLKDGQWVDVPPMRHSIVVNLGDQIEVITNGKYKSVEHRVIAQTNGTRMSVASFYNPANDAVIYPASSLLETKAEETDEVYPKFVFEDYMKLYATLKFQPKEPRFQAMKAVNSF* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1509 313 Pfam 2OG-Fe(II) oxygenase superfamily 162 256 IPR044861 -
Apr9g1509 313 Gene3D - 1 313 IPR027443 -
Apr9g1509 313 SUPERFAMILY Clavaminate synthase-like 3 308 - -
Apr9g1509 313 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 99 IPR026992 -
Apr9g1509 313 PANTHER ACC OXIDASE 2 3 307 - -
Apr9g1509 313 Coils Coil 110 137 - -
Apr9g1509 313 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 307 - -
Apr9g1509 313 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 256 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1509 Apr-Chr9 24655824 24657060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1509 5 292 Glycosyltransferase AT5G59530 33.333 2.45e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1509 K05933 - gmx:100815336 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1509 9 24655824 24657060 Apr10g2174 10 34229541 34230254 PCT