Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1299 ATGGTGACTATGGTTTCTCAAGACAACGTTGTGGCATTGGTTTCTCGTACAGGCAGAGAGTTGCAACGCTACAGAAAAGGTCGTCGACAGGTCGTGGGATGCATACCATACAGATATAAAATTGTTGATCAAACTTCCTTGGAGGCACCTGAAGAATTAGAGGTTTTGGTTATCACTTCTCAGAAAGGTAAAGGGATGCTATTTCCTAAGGGAGGTTGGGAATTAGACGAATCTAAAAAGGAGGCAGCTCTGCGAGAAACCATAGAGGAAGCTGGTGTTCGAGGCACTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGCAAAACTCATGATACTTTTTATGAAGGCTACATGTTCCCTCTACTTGTTCAAGAGCAATTAGAGTTTTGGCCAGAGCAAAACTTTCGTCAAAGAATATGGATGAGCGTTTCTGAAGCAAGGGAAGTTTGTCAACACTGGTGGATGAAAGAAGCACTAGAGAGACTAGTAAACCGTCTCATGGGTCGGAAACTTGGTCATGTGAAACAAATTGTAGGTTCTATACACTGCATTGGAGATGGCAAATCTGACTTGTAA 579 0.4266 MVTMVSQDNVVALVSRTGRELQRYRKGRRQVVGCIPYRYKIVDQTSLEAPEELEVLVITSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGTVGGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQNFRQRIWMSVSEAREVCQHWWMKEALERLVNRLMGRKLGHVKQIVGSIHCIGDGKSDL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1299 192 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 167 - -
Apr9g1299 192 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 188 - -
Apr9g1299 192 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 188 - -
Apr9g1299 192 SUPERFAMILY Nudix 23 167 IPR015797 -
Apr9g1299 192 CDD Nudix_Hydrolase_9 30 157 - -
Apr9g1299 192 Pfam NUDIX domain 54 162 IPR000086 -
Apr9g1299 192 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Apr9g1299 192 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1299 Apr-Chr9 22641346 22643249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1299 K07766 - gmx:100798559 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1993 10 32827866 32830332 Apr9g1299 9 22641346 22643249 PCT