Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1298 ATGATGTCGTTACTCTCTGATCTAGTCAATCTTAACCTCTCCGACACCTCGGAGAAGGTGATCGCCGAGTACATATGGGTCGGTGGATCCGGTATTGACATGAGGAGCAAAGCAAGGACTCTCTCAGGACCGGTTAATGACCCTTCCAAGCTTCCTAAGTGGAACTACGATGGTTCAAGCACTGGTCAAGCTCCTGGAGAAGATAGTGAAGTCATCTTATATCCACAAGCAATTTTCAAGGATCCATTCAGGAGGGGCAACAACATCTTGGTTATGTGTGACACTTACACTCCTGCTGGGGAGCCCATTCCGACAAACAAGAGACATAACGCTGCAAAGATATTCAGCCATCCTGATGTTGTTGCTGAAGAAACATGGTTTGGTATCGAGCAAGAATACACCTTGCTGCAAAAAGATGTACAATGGCCTATTGGATGGCCTATTGGTGGTTTTCCTGGACCGCAGGGACCATACTATTGCGGCATTGGTGCTAACAAAGCTTTTGGGCGTGATATTGTGGACTCCCATTACAAAGCCTGTCTTTATGCCGGCATTAACATCAGTGGAATTAATGGAGAAGTGATGCCTGGTCAGTGGGAATTCCAAGTTGGTCCAGCTGTTGGCATATCTGCTGGTGACGAGATATGGGTTGCTCGTTACATTCTAGAGAGGATTACTGAGATTGCTGGGGTGGTGCTTTCCTTTGACCCTAAACCAATTCAGGGTGATTGGAATGGTGCTGGTGCTCACACGAATTACAGTACCAAGTCAATGAGAAACAATGGAGGCTATGAAGTCATCAAGAAAGCAATTGCCAAGTTGGAGAAGAGGCACAAGGAGCACATCCATGCTTATGGAGAAGGCAATGAACGTCGTTTAACAGGACGACACGAGACTGCTGACATTAATACCTTTAAATGGGGTGTTGCAAACCGTGGTGCCTCTATTAGGGTAGGGAGGGACACGGAGAAGGCAGGGAAGGGATATTTTGAGGACAGAAGGCCTGCGTCTAACATGGATCCATACGTGGTTACTTCCATGATTGCAGAGACAACTATTCTATGGAAATGA 1071 0.4659 MMSLLSDLVNLNLSDTSEKVIAEYIWVGGSGIDMRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRHNAAKIFSHPDVVAEETWFGIEQEYTLLQKDVQWPIGWPIGGFPGPQGPYYCGIGANKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDEIWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNNGGYEVIKKAIAKLEKRHKEHIHAYGEGNERRLTGRHETADINTFKWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1298 356 ProSitePatterns Glutamine synthetase putative ATP-binding region signature. 238 254 IPR027303 -
Apr9g1298 356 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 105 356 - -
Apr9g1298 356 SMART Gln_synt_C_2 104 352 IPR008146 GO:0004356|GO:0006807
Apr9g1298 356 Pfam Glutamine synthetase, catalytic domain 168 347 IPR008146 GO:0004356|GO:0006807
Apr9g1298 356 PANTHER GLUTAMINE SYNTHETASE 2 356 - -
Apr9g1298 356 Gene3D - 2 104 IPR036651 GO:0004356|GO:0006542|GO:0006807
Apr9g1298 356 PANTHER GLUTAMINE SYNTHETASE 2 356 - -
Apr9g1298 356 SUPERFAMILY Glutamine synthetase/guanido kinase 104 353 IPR014746 GO:0003824
Apr9g1298 356 ProSitePatterns Glutamine synthetase signature 1. 56 73 IPR027302 -
Apr9g1298 356 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 20 100 IPR008147 GO:0004356|GO:0006542|GO:0006807
Apr9g1298 356 SUPERFAMILY Glutamine synthetase, N-terminal domain 15 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Apr9g1298 356 Pfam Glutamine synthetase, beta-Grasp domain 22 98 IPR008147 GO:0004356|GO:0006542|GO:0006807
Apr9g1298 356 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 107 356 IPR008146 GO:0004356|GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1298 Apr-Chr9 22624168 22632783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1298 K01915 - gmx:547953 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1298 9 22624168 22632783 Apr10g1991 10 32791767 32795889 PCT