Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1033 ATGTGTAATCCCAAACCATCTTCACCATCCCCATTTTTGTGTCCCACAAAAACCAACCTCATAACTCCCCATCACAAAGTTGTGTATCCTACTCATGATGATCAAGTTCAAGATGAATTGCACAGATGGCCAACTCTTAATGAGGCCTTTGCAGAAATCAAAGCAATAGGGAAGATATCATGCCCAACAGCCATAACTGGTTTACTCTTATATTCAAGAGCTATGATCTCTATGATTTTCCTTGGTTACCTTGGTGAGATGGAACTAGCAGGAGGGTCTCTCTCCATTGGTTTTGCCAACATCACTGGCTACTCTGTGATCTCTGGTTTAGCCATGGGAATGGAACCTATTTGTGGACAAGCTTATGGAGCAAAGCAATGGAAGATACTTGGCTTGACACTTCAAAGAACGGTTCTTCTCCTTCTATCAACATCTATTCCTATCTCATTCATGTGGCTCAACATGAAGAGAATTCTCTTGTGGTCAGGTCAAGACCATGAAATAGCATCAATGGCACAAACTTTCATTACTTTCTCTATTCCTGACCTTTTCTTACTCTCACTTCTTCACCCTTTAAGAATCTACCTCAGGACGCAAAGCATCACATTGCCATTAACATATTGCTCCGCTATCTCAATTTTGCTTCACGTGCCTTTGAATTTTCTCCTAGTGGTTCATCTAAAGATGGGTATTGCAGGAGTTGCCACAGCAATGGTGTTGACAAATCTCAACCTTATTCTATTCCTCTCCTCATTTGTTTACTTTTCTGGTGCATACAAGGACTCATGGGTTCCTCCAAGTGTGGATTGCATTAAAGGGTGGTCTTCATTGCTATCACTTGCAATTCCAACTTGTGTTTCAGTGTGCCTTGAGTGGTGGTGGTATGAGTTCATGATAATGTTGTGTGGCATTTTGGTTAATCCAAAAGCAACCATTGCTTCAATGGGAATCCTTATCCAAACAACATCTTTGGTCTATGTGTTCCCATCATCACTAAGCCTTGGTGTTTCCACAAGAGTTGGGAATGAGTTAGGTGCAAACAACCCTGGAAGAGCAAGAATTTCTATGATAGTGTCACTTTTTTGTGCTGTGGGTTTAGGCCTTGGAGCCATGTTGTTCACCACTTTGATGAGGCACCAATGGGGCAGGTTCTTCACCAATGACCATGAGATTTTGGAACTCACATCAATAGTGTTACCAATTGCTGGGCTTTGTGAGCTTGGGAACTGTCCACAAACCACAGGTTGTGGGGTTCTAAGGGGCAGTGCAAGACCCACCATTGGTGCCAACATCAATTTGGGCTCATTTTACTTGGTGGGTATGCCAGTGGCTATCCTTCTGGGCTTTGTGGCCAAAATGGGCTTTGCTGGGCTGTGGCTTGGGTTGCTTGCAGCCCAAGCCTCCTGTGCTGGGCTCATGCTCTTTGTTCTTTGCAAAACAGATTGGAATGTGCAAGTGGCAAGAGCTAAAGAACTCACACACACTTCAACAATAGCTGCCACTTCTTGCTCTGTTCCTATTGATTCTAACTCTAAATTACCTGCATTCACCAAAGTAGAGGCTAACATGAACAAGAATGCTCATGCTTGTCTTGAAGAGATAGTTATTAATGGTGGTGATGAGCTCACCAAGACATCTTCACTTGAAACAGATCCACTCATCATACACAGTACCAATCACACTCAGGAATAG 1692 0.4309 MCNPKPSSPSPFLCPTKTNLITPHHKVVYPTHDDQVQDELHRWPTLNEAFAEIKAIGKISCPTAITGLLLYSRAMISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLSTSIPISFMWLNMKRILLWSGQDHEIASMAQTFITFSIPDLFLLSLLHPLRIYLRTQSITLPLTYCSAISILLHVPLNFLLVVHLKMGIAGVATAMVLTNLNLILFLSSFVYFSGAYKDSWVPPSVDCIKGWSSLLSLAIPTCVSVCLEWWWYEFMIMLCGILVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANNPGRARISMIVSLFCAVGLGLGAMLFTTLMRHQWGRFFTNDHEILELTSIVLPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAILLGFVAKMGFAGLWLGLLAAQASCAGLMLFVLCKTDWNVQVARAKELTHTSTIAATSCSVPIDSNSKLPAFTKVEANMNKNAHACLEEIVINGGDELTKTSSLETDPLIIHSTNHTQE* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1033 563 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 506 - -
Apr9g1033 563 CDD MATE_eukaryotic 52 488 IPR045069 GO:0042910|GO:1990961
Apr9g1033 563 PANTHER PROTEIN DETOXIFICATION 31 506 - -
Apr9g1033 563 Pfam MatE 283 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr9g1033 563 Pfam MatE 62 222 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr9g1033 563 TIGRFAM matE: MATE efflux family protein 68 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1033 Apr-Chr9 19701483 19703391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1033 K03327 - gmx:100783792 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1033 9 19701483 19703391 Apr9g1033 9 19701483 19703391 ECH