Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1014 ATGGGTTGGGAAGAAGCTCTCTCTACTCTCTTAACCAAATCATTCACCGTCGTTGCCTGGCCTCCATTTAGCTTGCTTTGTTCCTTGTGTGTTTCTGTTCGGGCAATGGAGAGTGACTCCCATTCCAGCAACCAGCATTGCCTTGCTTTTTGGGTTCTGTTTTCCATGTCTATGATTATGGAATGGGAACTTCCAGCGTTATTTAACTGGATCCCATGGTGGCCTCATGTGAAATCCTTTGCAACAATCTTGCTGTTAATACCTTATTTTGGTGCTGCACCATCTATCTATAAGTTCTTAATTAAGCACTACTGCACTTGGAACCTATATACGAGGACATTGAACATCTTCAGTCAGAATAGCACACTCTTTGAATTAGATGAGGATAGCAAACTTCTTGACGTCTCTGACCAAACAAAAACATGTAAGGTACAGGAGAAGAAACTTGTAGAATATCAGGGGAGAGATGATCTTGCTGGTTGTGACAAGACAGAAAGCAGTTATACAAAGCTAACTGGTAAAAACCAAGTCCAGAAGGAATGGAGCTGTGCTTTATGTCAGATTAGTACTACCAGTGAAAATTGCCTAACGGTACACCTTAAAGGAAAGAAACACAAGACTAAGGAAAAAGAGCTTAGAGTTGAGTTTCATGTACCAAATAGCACTTACCTGTTATCCTCTACTCAGAAAAGAATCAAACGAATGGTTCTACTAAGTAATCTCAACCAAATTGCAAACATTCTGAATCCAGTTTCCAGATCCATAAGATGGTGTGGATGGACAAAGCCAGAGTTTGGATGGACAAAATTAAATACTGATGGTTCTATACAAAGAGAAACTGCTAGTTTTGGTGGGCTGCTTCGTGATTACAGGGGCAAACCAATCTGTGCTTTTGTCTCTAAAGTTCCTCAAGGAGATATTTTCTTGGTTGAGCTGTGGGCCATATGGAGAGGCCTTGTTCTTTCCTTAGGTCTTGGGATTAAAGCAATATGGGTGGAATCAGACTCCATGAGTGTTGTGAAGACAGTCAATAGAAAACAACCTTCTTGTCCAAAAGCTGATAGCTGTTTGAAACAAATCTGGAAACTATTAAAGAAGTTTGATGAATATCAGATTTCTCACTCCTGGCGTGAAACAAATAGAGCAGCAGATCATCTTACTAAGATGGTTCTTTGGGGAAATGATGTGGTTTTGTGGCCAGTTGATTTTCCACCTAGCCTTTGCAATATCATTAATGATGATGCCAAGGGAAAGAAATATCTTAGACGATAA 1272 0.4009 MGWEEALSTLLTKSFTVVAWPPFSLLCSLCVSVRAMESDSHSSNQHCLAFWVLFSMSMIMEWELPALFNWIPWWPHVKSFATILLLIPYFGAAPSIYKFLIKHYCTWNLYTRTLNIFSQNSTLFELDEDSKLLDVSDQTKTCKVQEKKLVEYQGRDDLAGCDKTESSYTKLTGKNQVQKEWSCALCQISTTSENCLTVHLKGKKHKTKEKELRVEFHVPNSTYLLSSTQKRIKRMVLLSNLNQIANILNPVSRSIRWCGWTKPEFGWTKLNTDGSIQRETASFGGLLRDYRGKPICAFVSKVPQGDIFLVELWAIWRGLVLSLGLGIKAIWVESDSMSVVKTVNRKQPSCPKADSCLKQIWKLLKKFDEYQISHSWRETNRAADHLTKMVLWGNDVVLWPVDFPPSLCNIINDDAKGKKYLRR* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1014 423 Gene3D Classic Zinc Finger 169 216 - -
Apr9g1014 423 PANTHER HVA22-LIKE PROTEINS 10 423 IPR004345 -
Apr9g1014 423 SMART ZnF_U1_5 178 212 IPR003604 GO:0003676|GO:0008270
Apr9g1014 423 Gene3D - 267 391 IPR036397 GO:0003676
Apr9g1014 423 PANTHER PROTEIN A, PUTATIVE ISOFORM 1-RELATED 10 423 - -
Apr9g1014 423 SUPERFAMILY Ribonuclease H-like 267 396 IPR012337 -
Apr9g1014 423 Pfam Reverse transcriptase-like 271 389 IPR002156 GO:0003676|GO:0004523
Apr9g1014 423 Pfam TB2/DP1, HVA22 family 30 103 IPR004345 -
Apr9g1014 423 SUPERFAMILY beta-beta-alpha zinc fingers 173 215 IPR036236 -
Apr9g1014 423 CDD RNase_H_like 270 388 IPR044730 -
Apr9g1014 423 Pfam Zinc-finger of C2H2 type 181 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1014 Apr-Chr9 19342192 19345432 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1014 - - gmx:102661917 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1014 9 19342192 19345432 Apr9g1014 9 19342192 19345432 ECH