Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1003 ATGGAACACTCCGATTCAACGCAGTGCGTGCGAGTTGCTGTTAACATTCGTCCTCTGATTACGTCTGAACTTTTGCTTGGTTGCACAGACTGCATCTCTGTTGTTCCTGGTGAACCTCAGGTGCAAATTGGGTCTCACGCTTTCACCTATGATTATGTCTACGGTAGTACGGGGTCGCCTTCGTCTGCAATATACGATGATTGTGTAGCTCCTCTTGTCGATGCGCTCTTCCATGGCTATAATGCAACGGTTCTTGCCTATGGCCAGACTGGATCTGGGAAGACATACACCATGGGTACCAATTACACCGGAGAGGAAAATTCCGGTGGAATTATACCCAAGGTGATGGAGACAATATTCAAGAGGGTTCAGGTTATGAAGGAATCCTCAGAGTTTTTGATTCGAGTATCTTTTATCGAGATATTCAAGGAAGAGGTATTTGACTTACTTGATCCCAATTCATCTAGAGGAGATGTGGCTTCTACTGCAAAGCCTGCTGTGCCCACCAGAGTTCCCATACAAATTAGAGAAACGGTGAATGGAGGAATAACATTGGCTGGTGTGACTGAGGCTGAAGTTAAGACAAAAGAAGAAATGTCATCTTATCTTTCTCGAGGTTCATTGTCTCGTGCCACTGGGAGCACAAACATGAACAGTCAATCAAGTCGTTCACATGCTATATTCACAATCACAATGGAGCAAAAGAATGGTGATGATGTCTTGTGTGCAAAACTACATTTGGTGGACCTTGCTGGTTCTGAACGTGCAAAAAGAACTGGTGCAGATGGCATGCGTTTGAAAGAAGGCATTCATATCAACAAGGGTTTATTAGCTCTTGGAAATGTAATAAGTGCACTGGGGGATGAACGAAAGCGGAAAGAAGGTGGCCATGTGCCGTATCGTGATAGCAAATTAACACGCCTACTGCAGGATTCTCTTGGAGGAAACAGCAAAACTGTGATGATAGCATGTGTCAGTCCTGCTGATACAAATGCTGAAGAGACATTGAACACTTTAAAGTATGCGAACCGTGCTCGCAACATTCAGAACAAGGCTATCATTAATCGTGATCCAGTAGGAGCTCAGCTACAGAGAATGCGAAGTCAGATTGAGCAATTACAGTCTGAGCTTCTATTTTATAAAGGTGATGCTGGTGGGCCATTTGAGGAACTCCAGATTCTTAAACACAAAATAACCTTACTAGAAGCAAGCAATGCAGAGCTACAGCGGGAACTTAAAGAACGTCGAGTAACTTGTGAGAGTTTAGCACAACGTGCTTGTGATGCTCAGGTAGAAAAGGACCAACTGATTATGAAAATAGAATCGGTTCGAAATGGTAAATCTTGGGATGAAATTGACTCAAATTCAAATCAGGATTATGACCTGGTGAAATCTTATGTGTCAAAGATCCAAGATCTGGAAAGTGAATTGCTGCGTCTGAGAAATTCGAATCTGAAATCTAGCCAATCTGTTGACTGGGTTGATTCAGATGATAGTGGATTCCAATCAAAGAATGGTTTATTTGCATGTGGTAACGAGTATTCTGATAGCGATGCCAAATCTGTGGACATAACAGAGGACGCGGAAGATCATGCAAAGGAAATGGAGCACTCTTCTCTTCAAGAAAAGTTGGATAAGGAGCTCAAAGAATTGGATAAGAAACTTGAACAAAAAGAGGCGGAAATGAAGCTGTTTAATAATGCTGATACTTCAGTTCTTAAGCATCATTATGAAAAGAAACTTCTTGAGTTAGAACAAGAGAAGAAATTTTTGCAGAAAGAAATTGAGGAACTTAGGTGCAATCTTGCAAATATTTCATCCACCTCTGGTGATGGCGCTCAAAAGTTAAAGGAAGAATATCTTCAAAAATTAAATGCTCTGGAAGCACAGGTCTCTGAACTAAAGAAGAAACAAGAAGCTCAGGCTCAACTGTTGAGACAAAAACAGAAAAGTGACGAGGCAGCGAAAAGACTTCAGGATGAGATCCAGAGAATTAAATCTCAAAAGGTTCAACTGCAACATAAGATTAAGCAGGAATCAGAACAATTTAGGTTATGGAAAGCTTCACGCGAAAAAGAAGTTCTCCAGCTTAAAAAAGAAGGAAGAAGGAATGAATATGAGATGCATAAGCTGCTAGCGTTGAATCAGAGGCAAAAGATGGTATTGCAAAGGAAGACAGAAGAAGCTTCCTTGGCTACAAAAAGGCTAAAAGAACTTTTGGAATCTCGAAAGGCTTCGTCACGTGAAACTACAGGCGGGAATGGTCCTGGAATTCAGGCTTTGATGCAGGCAATAGAGCATGAGCTTGAAGTCACAGTCCGAGTACACGAAGTTCGTTCAGCGTATGAGCGTCAAATGGAAGAGAGGGCTAAAATGGCCAAGGAGATTGCCAGATTGAAGGAAGAAGCAGAGACGATGAAGCTAAACAATACAAGGGATGGCCTCGCGTCAATGTCTCCGGGTGCAAGAAATTCAAGGATATTTGCCCTTGAAAACATGCTTTCTACTTCTTCTACAACACTAGTGTCAATGGCATCTCAGTTGTCAGAGGCAGAAGAGCGGGAACGGGTTTTCAGTGGCAAGGGACGTTGGAACCAAGTCCGGTCCCTTGCTGATGCCAAGAATTTGATGAATCATTTATTCAATCTAGCATCTTCCTCCAGGTGTTTATTGCGAGATAAAGAAGTTACCTGCAGAGAGAAGGACACAGAAATAAGAGATCTAAAAGAAAAAGTAGTTAGGCTGAGTTGTTCAATTCGACAGATGGAAATGCAGAAGGCTGAACTTATTCATCAGTTGAAGTTGCAGAGTGCAAAGAGATACTTGGAATCTGTGGGAGATTCGGCATATTCTGACGTAAATGTTGGAGGACATAAGTATGGCTTGCGCAAGGTGGAACACCGGAGATCTTCCATTTTACTGGAGGATATGGATTTATCAGTATCAGATACAGAATCAGATGATTATTATGTTCCAGATGCAACTGATGATGAATGGCCAACAGAAAAAATACACGTTAAGAAAAGAACATCTAAAAGTAGACATTTAAGCGTGGAAAATAATCAGTCAACTGTCAGTTCAGAAGATGTCAAAGATAATTCAACAGAAGGACTTGAAGGTGCATCCGGGGAAACTGCATCAGATATCTGCTGCTCCTGTAGTAAATCTTCATCTTGCAAGACAAACAAATGCAAGTGCAGGGCTCTGGGCAACAGTTGTGGGAGTTCTTGTGGTTGCCTAGCATCCAAGTGTGCCAACAGAGCATCAGTCTCAAATGAAGGGACCAGTAATGATTCTAGCACTGAGGAAGCAGACAAGGATCGCCTCCTTGCTGCTCAAGGTGCTGAGTTGCTTCAGGGTGCACTGGTTGAGGGGCCTGCTGAGGCCCACAGTGTTCATGGGCCAAGAAAACCTCTCTCTGATATTGGCAATACACTGGCCAAATCAAATGCCCAGAAAGCTAATCAAAGAAAGAAATGGCGGAAGTCCACAATAGTTCTTGTTTCAGACCCGCCACCTTCCTCGCAGTCAGATAACTCTGAAGTCTCAAAGAAAGAAAGTAACAGCATTAGTGAAGCGAATGTATTTATGAACATACCACAGAAAATGCACTGGAGTAGACCTGAAAATGTTTCAGTTGCCCCGAAGGTAGAGAAAAGTTTAACTGAGACAGATATACCTTTGAGAATACCACGGGCTATGCGAAAACAAGTATCATCAAATGTTGGTGGCCTTCCACTGGGAGACAGGAATGCTAGTAATAAGCCAGATGAATCTGTCAACAAGAAGGATTCTGAAGTGGTTGAAGCTAGAAGTCCGGTCCAACCAAAAAAAATATTTGAGAAAGAGAACAATGGACGTTAA 3864 0.4229 MEHSDSTQCVRVAVNIRPLITSELLLGCTDCISVVPGEPQVQIGSHAFTYDYVYGSTGSPSSAIYDDCVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGEENSGGIIPKVMETIFKRVQVMKESSEFLIRVSFIEIFKEEVFDLLDPNSSRGDVASTAKPAVPTRVPIQIRETVNGGITLAGVTEAEVKTKEEMSSYLSRGSLSRATGSTNMNSQSSRSHAIFTITMEQKNGDDVLCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALGDERKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAIINRDPVGAQLQRMRSQIEQLQSELLFYKGDAGGPFEELQILKHKITLLEASNAELQRELKERRVTCESLAQRACDAQVEKDQLIMKIESVRNGKSWDEIDSNSNQDYDLVKSYVSKIQDLESELLRLRNSNLKSSQSVDWVDSDDSGFQSKNGLFACGNEYSDSDAKSVDITEDAEDHAKEMEHSSLQEKLDKELKELDKKLEQKEAEMKLFNNADTSVLKHHYEKKLLELEQEKKFLQKEIEELRCNLANISSTSGDGAQKLKEEYLQKLNALEAQVSELKKKQEAQAQLLRQKQKSDEAAKRLQDEIQRIKSQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASLATKRLKELLESRKASSRETTGGNGPGIQALMQAIEHELEVTVRVHEVRSAYERQMEERAKMAKEIARLKEEAETMKLNNTRDGLASMSPGARNSRIFALENMLSTSSTTLVSMASQLSEAEERERVFSGKGRWNQVRSLADAKNLMNHLFNLASSSRCLLRDKEVTCREKDTEIRDLKEKVVRLSCSIRQMEMQKAELIHQLKLQSAKRYLESVGDSAYSDVNVGGHKYGLRKVEHRRSSILLEDMDLSVSDTESDDYYVPDATDDEWPTEKIHVKKRTSKSRHLSVENNQSTVSSEDVKDNSTEGLEGASGETASDICCSCSKSSSCKTNKCKCRALGNSCGSSCGCLASKCANRASVSNEGTSNDSSTEEADKDRLLAAQGAELLQGALVEGPAEAHSVHGPRKPLSDIGNTLAKSNAQKANQRKKWRKSTIVLVSDPPPSSQSDNSEVSKKESNSISEANVFMNIPQKMHWSRPENVSVAPKVEKSLTETDIPLRIPRAMRKQVSSNVGGLPLGDRNASNKPDESVNKKDSEVVEARSPVQPKKIFEKENNGR* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1003 1287 Coils Coil 463 483 - -
Apr9g1003 1287 ProSitePatterns Kinesin motor domain signature. 243 254 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr9g1003 1287 ProSiteProfiles Kinesin motor domain profile. 9 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1003 1287 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 7 1264 - -
Apr9g1003 1287 CDD KISc_KIF4 9 349 - -
Apr9g1003 1287 Gene3D Kinesin motor domain 4 382 IPR036961 -
Apr9g1003 1287 MobiDBLite consensus disorder prediction 1150 1188 - -
Apr9g1003 1287 Pfam Kinesin motor domain 42 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1003 1287 MobiDBLite consensus disorder prediction 1016 1031 - -
Apr9g1003 1287 MobiDBLite consensus disorder prediction 1168 1188 - -
Apr9g1003 1287 MobiDBLite consensus disorder prediction 1232 1287 - -
Apr9g1003 1287 MobiDBLite consensus disorder prediction 1255 1287 - -
Apr9g1003 1287 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 7 1264 - -
Apr9g1003 1287 Coils Coil 391 425 - -
Apr9g1003 1287 Coils Coil 782 809 - -
Apr9g1003 1287 Coils Coil 537 568 - -
Apr9g1003 1287 SMART CXC_2 1046 1090 IPR033467 -
Apr9g1003 1287 Coils Coil 722 742 - -
Apr9g1003 1287 Coils Coil 891 939 - -
Apr9g1003 1287 Coils Coil 574 608 - -
Apr9g1003 1287 Coils Coil 363 383 - -
Apr9g1003 1287 MobiDBLite consensus disorder prediction 1009 1044 - -
Apr9g1003 1287 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1003 1287 PRINTS Kinesin heavy chain signature 215 232 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1003 1287 PRINTS Kinesin heavy chain signature 244 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1003 1287 PRINTS Kinesin heavy chain signature 298 319 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g1003 1287 Coils Coil 610 682 - -
Apr9g1003 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 381 IPR027417 -
Apr9g1003 1287 SMART kinesin_4 7 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1003 Apr-Chr9 19161778 19171233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1003 6 377 Miscellaneous Gene Families AT5G06670 38.660 2.88e-60 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1003 - - gmx:100817984 2076.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1003 9 19161778 19171233 Apr9g1003 9 19161778 19171233 ECH