Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0992 ATGGGTGTGAAGCACTTCACCACCACCATCATCTTCTTAATAGTAATTAACCTCTCCACAATAACCCATGCCTACGATGATCCATGCGCGTCTCAACCCGACGATTCAGACGTGACGTTGATTCCCATCTACGGCAAGTGTTCACCTTTCAACTCCAATCCCAACCCCATAACGTGGGAAAACACAATCATCAACATGGCCTCCAAAGACCCAGAGAGGCTCCAATACTTATCCACCCTCGTCGCCAAACGGAGCAAAAAGCGCGTTTCCGCAGCCCCAATCGCTTCTGGTCAGGCCTTCAACATCGGCAACTACGTCGTCCGAGTTAGACTCGGCACACCGGGTCAACTCATGTTCATGGTCCTAGACACCAGCACTGATGAGGCCTGGGTCCCATGCACCGGCTGTTCCGGTTGCCCATCCACCACCGCCTATAACCCAAGAGCCTCCACCACTTTCGGTGGATCAATAGCTTGCTTCGCCCCACGCTGCACCCAAGTCCGTGGCGCCCTCCCTTGTCCCTCCACCGGTTCCACTGCTTGCTCCTTCAACCAATCCTATGCTGGGTCCTCATTCTCCGCCACGCTAGTGCAAGACTCGCTCAGGTTGGCCGTTGACACCATCCCAAACTACGCTTTCGGGTGCATCAACTCCGCCTCCGGTGGGTCAATCCCGGCCCAAGGGCTACTGGGCTTGGGCCGCGGGCCTTTATCGCTACTTTCACAAGCCTCATCACTCTCCTCCGGCGTCTTCTCCTACTGTCTCCCGAGTTTCAAGTCCTACTACTTTTCCGGGTCCCTCAAACTCGGGCCCACGGGTCAACCCAGACGAATCCGAACCACCCCACTTCTCCGAAACACGCGCCGCCCCTCTCTGTACTTCGTGAACCTCACCGGAGTAACCGTAGGCCGGGTCCGGGTCGCTCTACCCAGCGAGCTTCTAGCGTTTAACCCATACACTGGATCCGGAACCATAATAGATTCGGGTACGGTTATAACCCGGTTCGTGGAACCGGTTTACAATGCAATCAGGGACGAGTTTAGGAAACAAGTGAAAGGGCCATTCAGTAGCATCGGAGCATTTGACACGTGTTTTGTGAAGAACTATGAGAGGTTGGCACCGTTGATAAAATTTCACTTCACGGGTTTGGATCTAACTTTGCCGTTTGAGAATAGTCTCATACATAGTAGTTCTGGGTCGTTGGCTTGCTTGGCCATGGCGGCAACACCCAATAATGTGAACTCAGTGCTTAATGTGGTTGCCAACTTGCAGCAACAGAACCTTAGGATTTTGTTTGATACCGTTAATAATAAGGTTGGCATCGCTCGTGAGCTTTGTAACTAA 1344 0.5298 MGVKHFTTTIIFLIVINLSTITHAYDDPCASQPDDSDVTLIPIYGKCSPFNSNPNPITWENTIINMASKDPERLQYLSTLVAKRSKKRVSAAPIASGQAFNIGNYVVRVRLGTPGQLMFMVLDTSTDEAWVPCTGCSGCPSTTAYNPRASTTFGGSIACFAPRCTQVRGALPCPSTGSTACSFNQSYAGSSFSATLVQDSLRLAVDTIPNYAFGCINSASGGSIPAQGLLGLGRGPLSLLSQASSLSSGVFSYCLPSFKSYYFSGSLKLGPTGQPRRIRTTPLLRNTRRPSLYFVNLTGVTVGRVRVALPSELLAFNPYTGSGTIIDSGTVITRFVEPVYNAIRDEFRKQVKGPFSSIGAFDTCFVKNYERLAPLIKFHFTGLDLTLPFENSLIHSSSGSLACLAMAATPNNVNSVLNVVANLQQQNLRILFDTVNNKVGIARELCN* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0992 447 PANTHER ASPARTYL PROTEASES 8 447 IPR001461 GO:0004190|GO:0006508
Apr9g0992 447 SUPERFAMILY Acid proteases 98 446 IPR021109 -
Apr9g0992 447 Gene3D Acid Proteases 271 447 IPR021109 -
Apr9g0992 447 Pfam Xylanase inhibitor N-terminal 105 270 IPR032861 -
Apr9g0992 447 PANTHER ASPARTYL PROTEASE AED3-LIKE 8 447 - -
Apr9g0992 447 Pfam Xylanase inhibitor C-terminal 293 442 IPR032799 -
Apr9g0992 447 Gene3D Acid Proteases 79 270 IPR021109 -
Apr9g0992 447 ProSiteProfiles Peptidase family A1 domain profile. 105 442 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0992 Apr-Chr9 19028772 19030822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0992 78 447 Miscellaneous Gene Families AT1G77480 27.094 2.28e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0992 - - gmx:100809988 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0992 9 19028772 19030822 Apr9g0992 9 19028772 19030822 ECH