LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g0989	ATGGCCTCAATCTCAGGCATTTGCTCTTCCTCCCCAACTCTCAAACACCAAAACCATTCCCCAATACGACGTTGCACGCAACACCTCTCATTCACCACCCGCCCCAAACCCGCCCCCACGCGCTCCCTCGCACGTGAGGCTCCAGCGCAACTCTCCGCAATCACTAAAGGTGTGAACACGGGACTGGAGAAGGAACCTCGCCCCCTATGGCGACGCTACGTCGAGTGGCTCTACCAGCACAAGGATCTAGGACTGTACCTGGACGTGAGTCGGGTCGGGTTCAGCGACGAGTTCGTTCGCGAAATGGAGCCCCGGTTTCACTCGGCGTTTCGCGCCATGGAGGAGCTGGAGAAAGGTGCTATCTCGAACCCCGATGAGCGGCGCATGGTTGGGCATTACTGGCTTAGAGACTCGAAGCGTGCGCCGAACTCGTTCCTCAAGGCGCAGATTGATAACACGCTCGACGCCATTTGCACGTTCGCGAACGACGTCGTCAGTGGTAAGATTAAGCCTCCGTCGTCGCCGGAGGGCAGGTTTACTCAGGTACTTTCGGTTGGCATTGGAGGTTCTGCTCTTGGACCGCAGTTTGTTGCGGAGGCATTGGCTCCTGATAATCCTCCACTCAAGATAAGATTTATTGACAACACGGATCCTGCTGGAATTGATCATCAGATTGCTCAACTTGGTCCTGAGCTAGCTTCGACACTTGTGATAGTAATTTCAAAGAGTGGAGGTACCCCTGAGACTAGAAATGGCTTACTAGAAGTACAGAAAGCCTTCCGTGAAGCAGGATTGAATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCATTGTTGGATAACACTGCAAGAATTGAGGGCTGGTTAGCTAGATTTCCCATGTTTGACTGGGTGGGAGGTAGAACATCAGAGATGTCTGCAGTTGGCCTGCTTCCAGCAGCCCTTCAAAGCATTGACATCAGAGAAATGCTTGCTGGTGCAGCATTAATGGATGAGGCAAATAGGAATACCGTGATAAGGAATAATCCTGCAGCTTTGTTGGCATTATGTTGGTATTGGGCTACAGATGGTGTAGGATCAAAGGATATGGTTATCCTTCCGTATAAGGACGGTCTGTTATTATTTAGTAGGTACTTGCAACAGTTGGTCATGGAATCACTAGGCAAGGAATTTGACTTGGATGGTAATCGGGTTAATCAAGGAATTAGTGTCTATGGAAATAAAGGAAGCACAGATCAGCACGCCTACATTCAGCAACTGAGGGATGGTGTACACAATTTTTTTGTCACATTCATTGAGGTGCTACGTGATAGACCACCTGGTCATGATTGGGAGCTTGAACCAGGTGTCACATGTGGCGACTACCTGTTTGGTATGCTGCAGGGAACAAGGTCAGCCCTATATGCTAATAACCGTGAATCCATCACAGTGACTGTGCAAGAAGTGACACCCAGATCAGTTGGTGCCCTTATTGCACTTTATGAACGAGCAGTTGGGATATATGCTTCACTTGTTAACATAAATGCTTATCACCAACCTGGTGTGGAAGCTGGTAAGAAAGCCGCAGGAGAAGTATTAGCACTTCAAAAGCGGGTATTGGCTGTGCTAAATGAAGCAAGCTGCAAGGAGCCTGTCGAACCATTAACGCTTGAAGAAGTAGCTGACCGTTGTCATGCCCCAGAAGATATTGAAATAATTTATAAGATCATTGCTCATATGGCTGCCAATGACAGAGCACTAATTGCTGAAGGTAACTGTGGTTCTCCACGGAGCATCAAGGTTTTTCTTGGTGAGTGTAACGTTGATGAATTGTATTCTTGA	1827	0.4822	MASISGICSSSPTLKHQNHSPIRRCTQHLSFTTRPKPAPTRSLAREAPAQLSAITKGVNTGLEKEPRPLWRRYVEWLYQHKDLGLYLDVSRVGFSDEFVREMEPRFHSAFRAMEELEKGAISNPDERRMVGHYWLRDSKRAPNSFLKAQIDNTLDAICTFANDVVSGKIKPPSSPEGRFTQVLSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLNFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQSIDIREMLAGAALMDEANRNTVIRNNPAALLALCWYWATDGVGSKDMVILPYKDGLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLRDGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVQEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTLEEVADRCHAPEDIEIIYKIIAHMAANDRALIAEGNCGSPRSIKVFLGECNVDELYS*	609

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g0989	608	Hamap	Glucose-6-phosphate isomerase [pgi].	82	531	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	CDD	SIS_PGI_1	151	317	IPR035476	-
	Apr9g0989	608	SUPERFAMILY	SIS domain	70	531	IPR046348	GO:0097367\|GO:1901135
	Apr9g0989	608	CDD	SIS_PGI_2	363	527	IPR035482	-
	Apr9g0989	608	Pfam	Phosphoglucose isomerase	113	438	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	Pfam	Phosphoglucose isomerase	469	529	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	ProSiteProfiles	Glucose-6-phosphate isomerase family profile.	67	537	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	Gene3D	-	168	313	-	-
	Apr9g0989	608	MobiDBLite	consensus disorder prediction	1	21	-	-
	Apr9g0989	608	ProSitePatterns	Phosphoglucose isomerase signature 2.	504	521	IPR018189	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	Gene3D	-	314	513	-	-
	Apr9g0989	608	PRINTS	Glucose-6-phosphate isomerase signature	182	201	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	PRINTS	Glucose-6-phosphate isomerase signature	294	312	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	PRINTS	Glucose-6-phosphate isomerase signature	370	391	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	PRINTS	Glucose-6-phosphate isomerase signature	472	490	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	PRINTS	Glucose-6-phosphate isomerase signature	490	504	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	PRINTS	Glucose-6-phosphate isomerase signature	504	517	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	607	IPR001672	GO:0004347\|GO:0006094\|GO:0006096
	Apr9g0989	608	PANTHER	GLUCOSE-6-PHOSPHATE ISOMERASE	1	607	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g0989	Apr-Chr9	18984356	18993705	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g0989	K01810		-	gmx:100809452	1115.14

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr9g0989	9	18984356	18993705	Apr9g0989	9	18984356	18993705	ECH