Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0969 ATGTTTAGCGTTAAGGATTTAGTTGAATCGAATTGTTCGAGGTCTGTTCCCTCCAACTACATTTGCCTTAAAAGTCCCGAAGATTCCTTATTGTATGAAGAAGAGAATATTCCAACCATTGATTTTTCCCAACTCACCTCTTCCAATCCCGATGAAAGCTCCAAGGCAATCCAACAACTAGGCTATGCTTGCCGTGATTGGGGTTTCTTTATGCTAATCAATCATGGGGTGTCGGAGACACTGAGGGATGAGCTACTTAGGACAAGCCAAAGCTTTTTTGATCTGACTGAGGAAGAGAAGAGGCAGTACGCAGGAGAGAAGCTATTTGATCCAATAAGATGTGGTACAAGCTTCAATGTCATGGTGGACAAGACTCTTTTCTGGAGAGATTATCTCAAATGTCACGTTCACCCTCACTTCAATGCTCCTTCCAAGCCCCATGGATTTAGCGAAACTTTAGAGGAATACAGCAAAAAGGCCAGGGAACTGACTAGCGAGTTGCTAAAAGGAATATCTACGAGCTTGGGCCTAGAAGAAAACTACATACATAAAAGAATGAATGTAGAGCTGGGCTCCCAATTGCTGGTTATCAACTTTTACCCACCTTGTCCTAAGCCCGAACTTGTAATGGGCCTTCCTGCCCACACAGACCATGGGCTTCTGACCCTCCTAATGCAAAACGACCTTGGAGGGCTTCAAATTCAACACAACGAAAAGTGGATTCCTGTACACCCTTTACCTAACTCCTTTCTCATCAACACTGGGGATCACCTCGAGATTCTGACCAACGGAAAATACAAGAGCGTTGTTCATCGTGCTGTAGTGAATAAGAAAGGTCCTAGAATTTCCGTTGGCATTGCACACGGGCCACCCCTTGACAACATTGTTGGCCCTGCACCTGAGTTGCTTAACGAGAATACTCCCCCAGCATATCGTGCCATCAAATATAGAGATTATTTGCAGCTTCAGCAAAGCCATGAACTCGACAGAAAATCCTGCTTGGATCGTGTTCGAATTTGA 1020 0.4451 MFSVKDLVESNCSRSVPSNYICLKSPEDSLLYEEENIPTIDFSQLTSSNPDESSKAIQQLGYACRDWGFFMLINHGVSETLRDELLRTSQSFFDLTEEEKRQYAGEKLFDPIRCGTSFNVMVDKTLFWRDYLKCHVHPHFNAPSKPHGFSETLEEYSKKARELTSELLKGISTSLGLEENYIHKRMNVELGSQLLVINFYPPCPKPELVMGLPAHTDHGLLTLLMQNDLGGLQIQHNEKWIPVHPLPNSFLINTGDHLEILTNGKYKSVVHRAVVNKKGPRISVGIAHGPPLDNIVGPAPELLNENTPPAYRAIKYRDYLQLQQSHELDRKSCLDRVRI* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0969 339 PANTHER OS08G0480200 PROTEIN 24 335 - -
Apr9g0969 339 Pfam 2OG-Fe(II) oxygenase superfamily 193 284 IPR044861 -
Apr9g0969 339 Gene3D - 1 329 IPR027443 -
Apr9g0969 339 SUPERFAMILY Clavaminate synthase-like 3 329 - -
Apr9g0969 339 Pfam non-haem dioxygenase in morphine synthesis N-terminal 37 142 IPR026992 -
Apr9g0969 339 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 290 IPR005123 -
Apr9g0969 339 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 24 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0969 Apr-Chr9 18665118 18670424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0969 37 339 Glycosyltransferase AT5G59530 34.839 9.12e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0969 - - gmx:100798911 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0969 9 18665118 18670424 Apr9g0969 9 18665118 18670424 ECH