Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0928 ATGCAGAAGAAGCTTGGATTCCCAATCTCCAAGAGCCTCGACCAATTCAAATCGTTGTACGGTTCTATACCCGGAACTGCGAAGCCATTATCTTCGCGTCCTTCCAAAGATTCCATTTCATCGGGGAGTTTTGCTAATCTGAAGCTCACCGCAGAGAAATTGGTGAAAGAGCAAGCATCGGTGAAGACTGACCTTGAAAATGCGAATGCTAAGCTTAAGAAATCGCAGGAGCATATCCATGCTTTAGAAGAAAAATTGCAGAATGCCTTTAATGAGAATGCCAAGCTCAAGGTCAAGCAGAACGAAGATGAAAAACTCTGGAAAGGATTGGAGTCTAAGTTCTCGTCTACTAAGACTTTGTGTGATCAACTTACTGAGACTTTACAGCATTTGGCTGGTCTGGTTCAGGATGCCGAGAAAGATAAGGAAACATTGGAAAATAAATTGTCGTCAAGTTCAGAAGCTCTTGATAGCTTGAATAAGCAGATGGATGGTTTGTCTTTGAAGCTAGATTCTTCTCTGGAAACAATTAGATCCCGTGATAATGAGCTAGAGAAACTCAAATTTGCTACAGAAGAAAGGGAGAAGTTTCACAGAGATGAACAGTGCAGAGCTGCCACTATTGTACAAGAAAAGGATACAATGATAACAAATTTAGAAGAAATGTTAACAGCTAGTAAACTGGCTACAGAGAATTTGAACTCAAAGTTGGGAGAGGTACACCATCAGTTAAAAGTCAAAGAAGATGAAAATATGAATCACATAACCAGTCAAGAGAAATTGGAGAAAGAAAAGAATGATCTTCAGTTGAATAATGCTGGGCTTACTGAAAAACTCAACATGTCACTTCAGGAAATAAAAAACCTGGAAGGATCAATTCAGGCATTGGCCGCACATTTGTTAAATTTAGACAAAGAAAGCCTGAACCTTTTGAGCAAGTTTGATGAAATGAACTTGGTCTATGGTTCTTGCTTCAAATTGCTTCAGCAAGAGAGGGAAACATACTTGAAGCATGCTCAATACAAGTATAATGATCTTAATAATAATTTTTTGATCTTGGCATCAGAAAAAAATGTAATTGAAATGAAAAATTGTGAGTTAAGCAAAACTGTGAATGAACTTCAGAAAGTCCAAGAGTCTACTATAGCTCAACATGTGATGCAATCTCAATTAGCTGCTGAGAGAATTCAAAGTTTGGAGTCAGAAGCTGAAACTTTAATCTCAAAAAATGCAGAAGCAGAGGTCTTCATTTGCAAATTAGAGGAGAAAGTTGAAAATCTGTTAGAAAGTTCTAGATCATCAGACAACAAAATGCAAAGTTTATTGCTGAAGGTTTCAGCATTAGAGACTGAAAACAAAGAAAATGAAGAAAGACTGCAGGCAGATTTATTGAAGAAATCAGAGGAAATAGATACTTTGCAAAAGGAGAGAATGAAACTAGAGCAGCATGCAGATTCTCTTGATAAAGAAGTCATCCAGCTTCATAATGTCTTAGATGAAAAAGAACAGTGTATTTTACAGTATAAGGAACAGGAAAAGAAGCTTGAAGATCAGATCACAGAGAATCAATCATTATTGACTGCCGCTGAAAGTAAACTTTCAGAAGCTAAAAAGCAATATGATCAAATGGTAGAGAATAAGCAGTTAGAATTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATTAATGACATTAAGAGGAAGTATGAATTGGAGAAGATGGAAATTGTCAACATGGAAAAAGACAAGGCTCATAAAGCTATTGAAGAAATTGAGGGAAAGTGTGGCCAAAAACTTGCAGAATGCAAAGAAGAATCAAGGCAGCAGTTGATCCACATTCAGGAGGAACACACTTTGTTGGTAACTCAAATGCAGCAGGAGCAGGAGAAGAGGCAACTAAGCCTGATAGCTGAACAAAACGAACAACTAAAGCGTAGCCAACTGGAAGCTGAAAATGAACTCAGAGAGAAAACAATGTTTCTGAGGAATGACCATGAAGCTCAGATAAAAGCATTGAGGTGTGAACTTGAAGATGAGTGTCGGAAGCTAGAAGAGGAGTTGCATCTTCAGAAATCCAAAGAAGAGAGGCAAAGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAGCCAAAAGAGGACCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCATCAATTAAAAGAAGGAGTTCTTGTGGTGGCAAAAGAAGGCAGCGTGAACTGGACTCTCCTTACTTTGAAGCAACACAGACACCAGTGCCAAAGTTGTTGAAGAAAATGGAGAATGTGAAAACAGGAAGTGCAACGAGCATTCCTAACCATCATAGAAAGGTAACTCGTCACGAATACGAAGTTGAGACTTCTAATGGAAGAACTATTACAAAGAAAAGGAAAACAAGAAGTACTGTCATGTTTGAGGACCCCAGAAATCAAAAGATTAATACCCCAAAAGTAAATACCCCTGGAAGTATTGTTAAGAGCATCAAAGGTGGAGGACATCCTCATCCTTCAAACATCGGTGATTTATTTTCAGAAGGGTCTCTCAATCCATATGCAGATGATCCTTATGCATTTGATTAG 2601 0.3806 MQKKLGFPISKSLDQFKSLYGSIPGTAKPLSSRPSKDSISSGSFANLKLTAEKLVKEQASVKTDLENANAKLKKSQEHIHALEEKLQNAFNENAKLKVKQNEDEKLWKGLESKFSSTKTLCDQLTETLQHLAGLVQDAEKDKETLENKLSSSSEALDSLNKQMDGLSLKLDSSLETIRSRDNELEKLKFATEEREKFHRDEQCRAATIVQEKDTMITNLEEMLTASKLATENLNSKLGEVHHQLKVKEDENMNHITSQEKLEKEKNDLQLNNAGLTEKLNMSLQEIKNLEGSIQALAAHLLNLDKESLNLLSKFDEMNLVYGSCFKLLQQERETYLKHAQYKYNDLNNNFLILASEKNVIEMKNCELSKTVNELQKVQESTIAQHVMQSQLAAERIQSLESEAETLISKNAEAEVFICKLEEKVENLLESSRSSDNKMQSLLLKVSALETENKENEERLQADLLKKSEEIDTLQKERMKLEQHADSLDKEVIQLHNVLDEKEQCILQYKEQEKKLEDQITENQSLLTAAESKLSEAKKQYDQMVENKQLELSRHLKEISQRNDQAINDIKRKYELEKMEIVNMEKDKAHKAIEEIEGKCGQKLAECKEESRQQLIHIQEEHTLLVTQMQQEQEKRQLSLIAEQNEQLKRSQLEAENELREKTMFLRNDHEAQIKALRCELEDECRKLEEELHLQKSKEERQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSCGGKRRQRELDSPYFEATQTPVPKLLKKMENVKTGSATSIPNHHRKVTRHEYEVETSNGRTITKKRKTRSTVMFEDPRNQKINTPKVNTPGSIVKSIKGGGHPHPSNIGDLFSEGSLNPYADDPYAFD* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0928 866 Coils Coil 258 278 - -
Apr9g0928 866 MobiDBLite consensus disorder prediction 714 749 - -
Apr9g0928 866 MobiDBLite consensus disorder prediction 814 829 - -
Apr9g0928 866 PANTHER SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED 1 859 - -
Apr9g0928 866 Coils Coil 494 557 - -
Apr9g0928 866 Coils Coil 438 490 - -
Apr9g0928 866 Coils Coil 121 162 - -
Apr9g0928 866 MobiDBLite consensus disorder prediction 814 866 - -
Apr9g0928 866 Coils Coil 286 306 - -
Apr9g0928 866 Coils Coil 389 409 - -
Apr9g0928 866 Coils Coil 566 586 - -
Apr9g0928 866 Coils Coil 630 660 - -
Apr9g0928 866 SUPERFAMILY Tropomyosin 76 305 - -
Apr9g0928 866 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 1 859 - -
Apr9g0928 866 Coils Coil 51 99 - -
Apr9g0928 866 Coils Coil 666 686 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0928 - - gmx:100788684 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0928 9 17834835 17845657 Apr9g0928 9 17834835 17845657 ECH