Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0919 ATGGACAGCATAATGAGCAAGCTCCGCAATCTCGATGCGTACCCTAAAATCAACGAAGATTTCTATAGCCGCACGCTTTCCGGTGGCGTCATAACCCTCGCTTCCTCAATCCTCATGCTTGTGCTCTTCTTCTCCGAGCTTCGGTTGTATCTCCATGCGGTGACGGAGACTAAGCTTGTGGTGGATACTTCCAGAGGCGAAACGCTGCGTATCAATTTTGATGTTACGTTTCCTGCGTTACCATGTTCCATTCTTAGTCTTGATGCAATGGACATCAGCGGAGAGCAGCATCTAGATGTAAAACATGATATAATCAAGAAAAGATTAGATTCTCATGGCAATGTGATAGAAACAAGGCAAGATGGAATTGGTGCTCCCAAGATTGAAAAACCATTGCAAAGACACGGAGGAAGGCTTGAGCACAATGAGACTTATTGTGGTTCCTGTTTTGGTGCTGAAGCGTCAGATGAGGATTGTTGTAATTCCTGTGAGGATGTTCGTGAAGCATATCGTAAGAAAGGTTGGGCGCTTTCAAATCCAGATTTAATTGATCAGTGCAAAAGAGAAGGATTCTTGCAAAGAATCAAGGATGAAGATGGTGAAGGATGCAATGTGTATGGCTTCTTGGAAGTGAATAAGGTGGCAGGGAATTTCCATTTTGCTCCTGGGAAAAGCTTTCAGCAATCTGGTGTACATGTACATGACCTACTGGCTTTTCAAAAGGACTCCTTCAATCTTAGTCACCACATCAACAGATTAGCCTTTGGAGAGTATTTTCCTGGTGTCATTAATCCTCTTGACCGTGTGCATTGGACACAAGAAACACCAAGTGGGATGTATCAGTATTTTATTAAGGTTGTGCCTACTGTATACACTGACGTAAGTGGGCATTCTATCCAGTCAAACCAGTTCTCTGTGACAGAACACTTCAAGACTGGAGATGTGGGCCGTTTGCAGTCCCTCCCTGGGGTTTTCTTCTTCTATGACCTTTCTCCAATTAAGGTTACTTTTACCGAAGAACATGTCTCTTTCTTACATTTTCTTACTAATGTGTGTGCCATAGTTGGAGGTATTTTCACTGTTTCTGGAATACTAGATTCATTTATCTATCATGGTCAAAGAGCTATCAAGAAGAAGATGGAACTTGGTAAATTTAGCTGA 1161 0.4246 MDSIMSKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLVLFFSELRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDSHGNVIETRQDGIGAPKIEKPLQRHGGRLEHNETYCGSCFGAEASDEDCCNSCEDVREAYRKKGWALSNPDLIDQCKREGFLQRIKDEDGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNLSHHINRLAFGEYFPGVINPLDRVHWTQETPSGMYQYFIKVVPTVYTDVSGHSIQSNQFSVTEHFKTGDVGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGIFTVSGILDSFIYHGQRAIKKKMELGKFS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0919 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Apr9g0919 386 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 2 385 - -
Apr9g0919 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 2 385 IPR045888 -
Apr9g0919 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0919 Apr-Chr9 17672015 17678832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0919 K20367 - gmx:100782309 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0919 9 17672015 17678832 Apr9g0919 9 17672015 17678832 ECH