Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0903 ATGGGTTCTTTCTTTAGTATGGCTAATACCAAATCCAGTCGAAGTGAGTCTAATGAGGTCTCTCCAAATGAGAGCTGCAAGAGGCAAAGAATATCACCTCCCTCTGTTGAAGAATGTCCAAGACTTATTCCTAATCTCCCTGACGAGTTATCACTTCAGATTATTGCTAGACTTCCTAGAATTTGTTACTACCATGTACGACTGGTGTCTAGGAAGTGGAAGGACACTATCACAAGTTCAGAATTATATAAAGTAAGGAAAGAACTTGGAACAACTGAAGAGTGGCTATATCTATTGGTTAGGATTGGAGAAAATAAACTCTTATGGCATGCCTTAGACCCCCGTTCTCAGATATGGCAGAAGCTTCCTATAATGCCCAATGTTGTTGATGAAGAAGAATCCCAAAAGGCTTCTTCTAGGCTTTGGATGTGGAACATGGTAGAAGGCATCAGAATTGCTGAAATTATTAGAGGACTGCTTGGGCAGAAGGATGTGTTGGATGAAATGCCCTTTTGTGGTTGTGCCATTGGTGCTGTTGATGGATGTCTTTATGTTCTAGGTGGATTCTCAAAAGCTTCAACCATGAGATGTGCTTGGCGATTTGATCCAATACAAAATGCATGGAAGAAGGTGACTTCTATGTCTACAGGTAGGGCTTACAGTAAGACAGGCATCTTAAATAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAAGTCAAGCTGGACTGATTCCTCTTCAGTCTGCAGAGGTTTTTGACCCCCGCACAGGTACATGGTCCCAAGTACCTAGTATGCCATTCTCAAGAGCTGGAGTCCTGCCCACAGCCTTTTTGGCTGACATGTTAAAGCCTATTGCCACAGGGTTAACCCCATACAAGGGGAAGTTATACGTTCCCCAAAGTTTATATTCATGGCCCTTTTTTGTTGATGTTGGGGGAGAAATATATGATCCTGAAACAAATTCATGGATGGAAATGCCAACTGGAATGGGTGAGGGCTGGCCTGCTCGGCAGGCAGGTACAAAGTTGAGTGTTGTAGTGAATGATGAATTATATGCTTTTGATCCTTCTAATTCCGTGGATAGTGGAATGATCAAGGTATATGATCACAGAGAAGATGCATGGAAAGTTGTCATTGGAAAAGTCCCTAAATATGATTTTACTGATTCAGAGTCTCCATATCTACTTGCTGGTTTCCATGGAAAGCTTCATTTCATTACAAAAGATGTCAATCATGATATTGCTGTTTTGCAGGCTGATCTGCACAGTAATTTGGATTCTTCACCATCCACCTCAACACCTCTATCACCCAAGTATATGAATGGATTATTTCCAGAATCTGCTGCTGAAACTGATGCAGTTGTTTGGAAAGTAGTTGCCAGTAGGGGTTTTGGGCAGGCTGAACTGATTAGTTGCCAAGTTATTGATATCTAA 1434 0.4163 MGSFFSMANTKSSRSESNEVSPNESCKRQRISPPSVEECPRLIPNLPDELSLQIIARLPRICYYHVRLVSRKWKDTITSSELYKVRKELGTTEEWLYLLVRIGENKLLWHALDPRSQIWQKLPIMPNVVDEEESQKASSRLWMWNMVEGIRIAEIIRGLLGQKDVLDEMPFCGCAIGAVDGCLYVLGGFSKASTMRCAWRFDPIQNAWKKVTSMSTGRAYSKTGILNNKLYVVGGVSQSQAGLIPLQSAEVFDPRTGTWSQVPSMPFSRAGVLPTAFLADMLKPIATGLTPYKGKLYVPQSLYSWPFFVDVGGEIYDPETNSWMEMPTGMGEGWPARQAGTKLSVVVNDELYAFDPSNSVDSGMIKVYDHREDAWKVVIGKVPKYDFTDSESPYLLAGFHGKLHFITKDVNHDIAVLQADLHSNLDSSPSTSTPLSPKYMNGLFPESAAETDAVVWKVVASRGFGQAELISCQVIDI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0903 477 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Apr9g0903 477 MobiDBLite consensus disorder prediction 1 30 - -
Apr9g0903 477 Pfam F-box-like 43 84 IPR001810 GO:0005515
Apr9g0903 477 SMART fbox_2 46 86 IPR001810 GO:0005515
Apr9g0903 477 SUPERFAMILY F-box domain 42 98 IPR036047 GO:0005515
Apr9g0903 477 SMART kelc_smart 182 228 IPR006652 GO:0005515
Apr9g0903 477 SMART kelc_smart 229 279 IPR006652 GO:0005515
Apr9g0903 477 SUPERFAMILY Kelch motif 98 383 IPR015915 GO:0005515
Apr9g0903 477 Gene3D - 105 385 IPR015915 GO:0005515
Apr9g0903 477 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 477 - -
Apr9g0903 477 MobiDBLite consensus disorder prediction 1 32 - -
Apr9g0903 477 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 3 477 - -
Apr9g0903 477 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Apr9g0903 477 Pfam Kelch motif 170 215 IPR006652 GO:0005515
Apr9g0903 477 Gene3D - 41 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0903 Apr-Chr9 17381616 17384710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0903 46 264 Miscellaneous Gene Families AT4G33900 28.000 1.89e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0903 - - gmx:100815614 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0903 9 17381616 17384710 Apr9g0903 9 17381616 17384710 ECH