Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0901 ATGCCTTATCAGCTATCATATTTTATGTGCATACCCCATGCAGTGTCGGTTCAACCTAGTACAACACCAAGCAGTTCCAAGTCTGACAGAACACGGAGAGTTGATTATCTCACAAAAATCCCTCGGAGTGCCAACATGGAAAACTTCCATAGTGGATATTTGTTTCCTGAGATATTCCGGCGTGAGTCTGAATATTCTAAGAGGAATCCAAATACAAGGTTGATAAGACTTGGTATTGGTGATACTACAGAGCCAATACCAGACATCATAACATCAGCTATGGCTGAGCAAGCATTGGGTCTATCAACGGTTGAAGGCTATAGGGGTTATGGACCTGAGCAAGGTAACAGGGAGCTAAAGAGGGCAATAGCAGAAACCGTTTACCAAGATATGCAAGTGAAAGAAAATGAGATTTTTGTATCTGATGGTGCAAAGTGTGATATTTCTCGCGTTCAGATGCTTTTGGATGGTAGTTTGTCGGTTGCTGTGCAAGACCCAACTTTTCCGGCGTACATAGATTCGAGTGTCATTATTGGTAGGGCTGGCATGTTGCAAGCAGAGACTGGAAAGTACAAAAATGTCGTGTATATGAAGTGTAGACCTGAAAATAATTTTTTTCCAGACTTGTCAACCACTCCAAGAACTGATGTTATTTTCTTTTGTTCCCCAAACAATCCAACTGGTAATGCTGCATCACGGCACCAACTGAAGCAACTTGTTGAGTTTGCAAAAGCAAATGGGTCTATGATAATTTATGATGCTGCTTATGCTGCTTACATATCTGATCAAAGCCCAAGATCAATCTTTGAAATTCCTGGAGCCAAAGAGGTGGCAATTGAAATTTCATCGTTTTCAAAATTTGCTGGCTTTACTGGTGTCCGCCTTGGGTGGACAGTGGTCCCTGAAGAGCTTTTGTATGCTAATGGTTATCCAGTCATAAAGGATTATAATCGCATTGTTTGCACTTGCTTCAATGGTGCATCTAACATTGTTCAAGCTGGTGGACTTGCATGCCTTTCTCCTGAAGGATTACAGGCACTAAAAACAAGCGTGAGGTACTACATGGAAAATGCGAAGTTACTTGTTGACACGTTTGAATCACTTGGTCTAAAGGTATATGGAGGAAAAAATGGGCCTTACGTGTGGGTGCATTTTCCAGGGTTGAGTTCATGGAATGTGTTCAACCATATTCTTGAGAAAGCAGCCATAGTCACTATCCCGGGCATAGGATTTGGTCCTGGCGGCGAGGGCTATATTAGAGTTAGTGCCTTCGGTCGCAGAGAATCTGTATTGGAAGCTTCAAGGAGATTGACAAAACTTTTTAAAAATATATGTTATATATCCAAATGTTGA 1353 0.4154 MPYQLSYFMCIPHAVSVQPSTTPSSSKSDRTRRVDYLTKIPRSANMENFHSGYLFPEIFRRESEYSKRNPNTRLIRLGIGDTTEPIPDIITSAMAEQALGLSTVEGYRGYGPEQGNRELKRAIAETVYQDMQVKENEIFVSDGAKCDISRVQMLLDGSLSVAVQDPTFPAYIDSSVIIGRAGMLQAETGKYKNVVYMKCRPENNFFPDLSTTPRTDVIFFCSPNNPTGNAASRHQLKQLVEFAKANGSMIIYDAAYAAYISDQSPRSIFEIPGAKEVAIEISSFSKFAGFTGVRLGWTVVPEELLYANGYPVIKDYNRIVCTCFNGASNIVQAGGLACLSPEGLQALKTSVRYYMENAKLLVDTFESLGLKVYGGKNGPYVWVHFPGLSSWNVFNHILEKAAIVTIPGIGFGPGGEGYIRVSAFGRRESVLEASRRLTKLFKNICYISKC* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0901 450 Gene3D Aspartate Aminotransferase, domain 1 54 437 IPR015422 GO:0003824
Apr9g0901 450 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC-RELATED 22 442 - -
Apr9g0901 450 PANTHER AMINOTRANSFERASE 22 442 IPR019942 GO:0008483
Apr9g0901 450 SUPERFAMILY PLP-dependent transferases 50 437 IPR015424 -
Apr9g0901 450 Hamap LL-diaminopimelate aminotransferase [dapL]. 41 440 IPR019942 GO:0008483
Apr9g0901 450 CDD AAT_like 75 437 - -
Apr9g0901 450 Pfam Aminotransferase class I and II 74 430 IPR004839 GO:0009058|GO:0030170
Apr9g0901 450 Gene3D - 84 341 IPR015421 GO:0003824
Apr9g0901 450 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 44 439 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0901 Apr-Chr9 17354763 17359117 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0901 K10206 - tcc:18592224 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0901 9 17354763 17359117 Apr9g0901 9 17354763 17359117 ECH