Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0876 ATGCATCCTTTCTGCTGCGTCTCCGCCGTCTCCGATCACTCTTCTCCGGTCAAACCCTCGCCAACCGCTCCGCTCGCCGTCCTCACCATGCCTCCTCTTCCCGCCGCCGTGAGATCCGATTCGGAACCGCGGCACGGCCAAATCAGCCTCTGCATCGCCAACGGCGGTGACAGCAACCGCGCCGTTCATCCTCCGGCAGCGGCTGCGGTGGACGTGAAGATCAACGACCTCGTCGGGAACGGAATCTCCGGGATACTGAACAAGTGGGTGAACTACGGCAAAGGATGGAGGCCACGGTGGTTCGTGCTCCAAGACGGTGTCCTCTCTTACTACAAGATTCATGGTCCTGATAAGATCGTTGTCAATTCGGAAACCGAGAAGGGATCCAAGGTCATTGGTGAGGAATCCATGCGCATCATCTGTCGCAATCGCAATTCGAATCACCATCACCACCACAATAACTTCAACCATCGTCGTAAGCCCGTCGGCGAAATCCACCTCAAGGTTTCGACTATTCGTGAGAGTAGATCGGATGACAAGCGATTTTCCATTTTCACTGGGACAAAGAGACTTCACTTGAGGGCTGAGACTCGTGAGGATCGAGTGGCATGGATGGAGGCCTTGCAGGCGGTGAAAGATATGTTTCCCCGGATGTCGAACAGTGAGCTGATGGCACCGGTGGACAATGTGGCCATTTCAACTGAGAAACTGAGGCTTCGGCTCATGGAGGAAGGTGTAAGTGAGGCAGCCATTCAGGACAGTGAACAAATTATGAGAAATGAGTATGCGGCGATGCAAAACCAGATTCTGTTGCTTAAGCAGAAGCAGTTGACCCTAGTCGACACTTTACGGCAATTAGAGACAGAAAAGGTTGATCTGGAGAACACTGTTGTTGATGAGAGTCAAAGACAGTTGAATGATCAGGAGGCTTCCTCTAGATTAAGGCAAGAAAAATCTAGTGCTAGTGCAAGTGAGTCTGAGGATGATAATGAGAGAAATGATGCAGCAGAGGAAGAGACAGATGATGACGAGGCTGCCTTTTTTGACACTCGTGATTTTCTTTCATCGTCCAGTTCATTTAAAAGTAATGGATCTGATTTTAGGGTTTCGTCTTTCTCCTCAGATGACGGACTCTATGCAGTTGATTCAGAGGAGGATGTAGATCCTTCAATTAGATCTGTTGGGACGAACTATCCTATTGTTAAGCGGCGTAAGAAATTGCCTGACCCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGCAGGGATCTAACTAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCCTCTCTACAAAAATGTTGTGAAGAAATGGAGTATTCGTATCTTCTAGACCGAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCAGCCTATGCTTCAACTGAAGGAAGAATTTGCAAACCATTTAATCCATTACTAGGGGAAACATATGAAGCTGACTTTCCAGATAAAGGCTTCCGATTTTTCTCAGAGAAGGTTAGTCATCATCCTATGATAGTCGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGTGATAGCAACTTAAAGAGTAAATTTTGGGGTCGATCAATTCAGCTTGATCCTGTTGGTATTTTAACTTTGGAATTTGATGATGGTGAAGTATTCCAATGGAGTAAGGTCACTACATCAATATACAATCTTATACTGGGAAAGCTGTATTGTGATCATTATGGTACAATGCGTATACAGGGGAATCGAGACTACTCATGCAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCATGGTATTGTTCAGGATAGAAATGGTAAAACATTGTCTACATTACTCGGAAAATGGGATGACAGCATGTATTATATCAATGGAGACTATGGTGGGAAGGGGAAAGGTTATGAATCATTGTCTGAAGCCCATCTAATATGGAAGCGGAGCAAGCCTCCCAAGTTTCCCACTAGATATAACTTCACTCGGTTCGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGAAAAGCTGCCACCTACTGATTCCAGGTTAAGACCAGACCAAAGGCATTTGGAAAATGGGGAGTATGAGATGGCAAATTCAGAAAAGTTACGGCTAGAACAACGGCAACGCCAGGCTCGAAAAATGCAAGAGAGCGGATGGGAACCACGGTGGTTTGCTAGGGATAAAGCAAGCGGTACATACCGCTATTTAGGAGGGTATTGGGAGGCCCGAAAACAAGGAAACTGGAACTCCTGTCCTGACACTTTTGGCCAAATTCCTTCCGATCAGCTTTCAGAAGAAGGTCAATATACATTGTAG 2403 0.4565 MHPFCCVSAVSDHSSPVKPSPTAPLAVLTMPPLPAAVRSDSEPRHGQISLCIANGGDSNRAVHPPAAAAVDVKINDLVGNGISGILNKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNSETEKGSKVIGEESMRIICRNRNSNHHHHHNNFNHRRKPVGEIHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPVDNVAISTEKLRLRLMEEGVSEAAIQDSEQIMRNEYAAMQNQILLLKQKQLTLVDTLRQLETEKVDLENTVVDESQRQLNDQEASSRLRQEKSSASASESEDDNERNDAAEEETDDDEAAFFDTRDFLSSSSSFKSNGSDFRVSSFSSDDGLYAVDSEEDVDPSIRSVGTNYPIVKRRKKLPDPVEKEKGVSLWSMIKDNIGRDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGRRGNSLMRILNVAAFAVSAYASTEGRICKPFNPLLGETYEADFPDKGFRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNRDYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTLSTLLGKWDDSMYYINGDYGGKGKGYESLSEAHLIWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEMANSEKLRLEQRQRQARKMQESGWEPRWFARDKASGTYRYLGGYWEARKQGNWNSCPDTFGQIPSDQLSEEGQYTL* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0876 800 Gene3D - 715 781 - -
Apr9g0876 800 MobiDBLite consensus disorder prediction 310 329 - -
Apr9g0876 800 SMART PH_update 80 215 IPR001849 -
Apr9g0876 800 Gene3D - 80 215 IPR011993 -
Apr9g0876 800 SUPERFAMILY Oxysterol-binding protein-like 413 792 IPR037239 -
Apr9g0876 800 Coils Coil 283 303 - -
Apr9g0876 800 CDD PH_ORP_plant 82 220 - -
Apr9g0876 800 SUPERFAMILY PH domain-like 82 219 - -
Apr9g0876 800 MobiDBLite consensus disorder prediction 330 346 - -
Apr9g0876 800 Coils Coil 723 743 - -
Apr9g0876 800 MobiDBLite consensus disorder prediction 299 347 - -
Apr9g0876 800 Pfam Pleckstrin homology domain 88 209 - -
Apr9g0876 800 Gene3D - 504 678 - -
Apr9g0876 800 Pfam Oxysterol-binding protein 418 773 IPR000648 GO:0008289
Apr9g0876 800 ProSiteProfiles PH domain profile. 79 213 IPR001849 -
Apr9g0876 800 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 790 - -
Apr9g0876 800 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 790 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0876 Apr-Chr9 16887441 16894372 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0876 K20456 - gmx:100812036 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0876 9 16887441 16894372 Apr9g0876 9 16887441 16894372 ECH