Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0833 ATGGCTCAAACCATGGTACTCATGTCTAGTGTCCCAGCTAGCAATTCCATGGATCTGAAGGGGAACTCTTTGCTCCAACTACGAAGTCAAAGATTAAGGCCTAAGTTCTCTCGTCACTTTTTCAACCCACTTCCTTCAACTTTTTCTTTTCCTTCTTCATCAAGTACATTCACAACAATAGCCATCTACAAAACAAAGACCAAGGCCTCTCCCACCAGCAAGGTTGTGAAGTCCAAGCCAAAGTCAAAGGTTGAAGATGGGATTTTTGGCACTTCTGGAGGGTTTGGCTTTACTAAGCAGAACGAGCTCTTTGTGGGTCGTGTTGCCATGCTCGGTTTTGCTGCATCATTGTTGGGTGAAGCAATTACTGGGAAAGGAATATTAGCACAACTTAATCTGGAAACTGGAATTCCAATTTATGAAGCAGAGCCTCTTCTTCTTTTCTTCATCATTTTCACATTATTAGGAGCCATTGGAGCACTTGGTGACCGTGGTCAATTTGTTGATGACCCTCCCACTCCATTGGATAAGCCATTCATTCCTCCAGGCAAAGGATTCAGAGCTGCTTTGGGTCTCAGGGAAGGAGGTCCTTTATTTGGGTTTACCAAAGCGAACGAGCTCTTTGTTGGAAGGTTGGCTCAAATGGGTTTTGCTTTCTCCTTAATTGGCGAAATTATAACTGGAAAAGGAGCTCTAGCTCAGCTCAACATTGAGACTGGGGTGCCCATAAACGAAATAGAACCACTAGTGTTGTTCAGCATTGTGTTTTTCTTCTTTGCTGCTTTGAATCCTGGAACTGGTCATTTTGTTACAGACGAGGGCGAGGAAGTGTAG 834 0.4388 MAQTMVLMSSVPASNSMDLKGNSLLQLRSQRLRPKFSRHFFNPLPSTFSFPSSSSTFTTIAIYKTKTKASPTSKVVKSKPKSKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGQFVDDPPTPLDKPFIPPGKGFRAALGLREGGPLFGFTKANELFVGRLAQMGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFSIVFFFFAALNPGTGHFVTDEGEEV* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0833 277 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 1 183 - -
Apr9g0833 277 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 199 261 - -
Apr9g0833 277 SUPERFAMILY Chlorophyll a-b binding protein 80 255 - -
Apr9g0833 277 Pfam Chlorophyll A-B binding protein 93 221 IPR022796 -
Apr9g0833 277 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 199 261 - -
Apr9g0833 277 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 183 - -
Apr9g0833 277 Gene3D Chlorophyll a/b binding protein domain 141 247 - -
Apr9g0833 277 Gene3D Chlorophyll a/b binding protein domain 41 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0833 Apr-Chr9 15971186 15973665 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0833 K03542 - qlo:115959834 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0833 9 15971186 15973665 Apr9g0833 9 15971186 15973665 ECH