Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0816 ATGGCGCATTCAATTTGGTTCTTCTTCTTCGTGTCCCTTCTCTCTCTCTTCGCATCTCAGATCTCCGCAAACGAGACTGAAGCCAAAGAGTTCGTTCTCACATTGGATCATTCCAACTTCTCCGATACCGTTAGCAATTACAATTTCATCGTCGTCGAGTTCTACGCTCCTTGGTGCGGCCACTGTATGAAGCTTGCTCCTGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGCCATGATCCTCCAGTTCTTTTAGCTAAAGTTGATGCCAATGATGAAAAGAACAGAGAACTTGCAAACGAATTTGAAGTTCAGGGATTTCCAACAATTAAGATTCTGAGAAATGGGGGTAAGGTCGTGCAAGAATACAAAGGTCCACGTGAAACAAATGGTATTGTTGACTATTTGAAAAAGCAAAGTGGTCCTGCAACAACTGAAATTAAATCTGTTGATGATGCTAGTGTTATTATTGGTGAAAATAAAGTTGTTATTGTTGGGATTTTCCCAAAATTTTCTGGGGAAGAGTTTGAGAACTTTACTGCATTGGCAGAGACATTGCGTTCTGAATACGATTTTGGTCACACTTTGGATGCCAAACACCTTCCTCGGGGAGAATCATCAGTGACTGGGCCCGTAATTAGATTATTTAAGCCATTTGATGAGCTTTTTATTGACTTCAAGGATTTCCATGTGGAAGCTTTAGAAAAATTTGTTGAAGAATCCAGTGTCCCTATTGTGACTATCTTTAACAATGACCCAAGCAATCACCCGTTTGTTATCAAATTCTTTAACAATCCCCATGTAAAGGCAATGATGTTCATCAACTTCACTGCTGACACGGCTGATTCTCTGAAATTAAAATACCATGAAACTGCCGAGCAATATAGAAAAGAGGGCATAAGCTTTCTAGTGGGAGACGTTGAGGCCAGTCAAGGTGCATTCCAGTATTTTGGCCTTAAGGTGGACCAAGTGCCTCTAATTATCGTTCAACATAATGACGGGTCAAAATTTTTGAAAACTAATTTGGAACCTGATCATATTGCAACTTGGTTGAAGGCATACAAGGATGGAAATGTTGAACCATTTAAGAAGTCTGAACCTATTCCGGAAGTTAACAATGAACCTGTTAAAGTGGTGGTTGCAGACAATTTTCAGGACGTAGTTTTCAACTCAGGGAAAAATGTTTTGCTGGAGTTTTATGCACCTTGGTGTGGTCATTGCAAAAAGTTGGCTCCAATATTGGAGGAAGTTGCTGTTTCATATCAAAGTAATCCTGATGTTGTTATTGCAAAACTGGATGCAACTGTCAACGATATCCCTAGTGAACCTTTTGATGTACGAGGATATCCAACTCTGTACTTCAGGTCAGCAAGTGGAAAGATATCACAGTATGATGGAAATAGGACGAAGGAAGATATCATAGATTTCATTGAAAAGAACCGGGATAAACCGGATCAACAAGAACAAGTAAAAGATGAGCTTTGA 1485 0.3973 MAHSIWFFFFVSLLSLFASQISANETEAKEFVLTLDHSNFSDTVSNYNFIVVEFYAPWCGHCMKLAPEYEKAASILSSHDPPVLLAKVDANDEKNRELANEFEVQGFPTIKILRNGGKVVQEYKGPRETNGIVDYLKKQSGPATTEIKSVDDASVIIGENKVVIVGIFPKFSGEEFENFTALAETLRSEYDFGHTLDAKHLPRGESSVTGPVIRLFKPFDELFIDFKDFHVEALEKFVEESSVPIVTIFNNDPSNHPFVIKFFNNPHVKAMMFINFTADTADSLKLKYHETAEQYRKEGISFLVGDVEASQGAFQYFGLKVDQVPLIIVQHNDGSKFLKTNLEPDHIATWLKAYKDGNVEPFKKSEPIPEVNNEPVKVVVADNFQDVVFNSGKNVLLEFYAPWCGHCKKLAPILEEVAVSYQSNPDVVIAKLDATVNDIPSEPFDVRGYPTLYFRSASGKISQYDGNRTKEDIIDFIEKNRDKPDQQEQVKDEL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0816 494 CDD PDI_b'_family 259 355 - -
Apr9g0816 494 TIGRFAM pdi_dom: protein disulfide-isomerase domain 36 139 IPR005788 GO:0003756
Apr9g0816 494 TIGRFAM pdi_dom: protein disulfide-isomerase domain 380 480 IPR005788 GO:0003756
Apr9g0816 494 PANTHER PROTEIN DISULFIDE ISOMERASE 8 488 - -
Apr9g0816 494 SUPERFAMILY Thioredoxin-like 145 244 IPR036249 -
Apr9g0816 494 TIGRFAM ER_PDI_fam: protein disulfide isomerase 32 489 IPR005792 GO:0003756
Apr9g0816 494 SUPERFAMILY Thioredoxin-like 241 373 IPR036249 -
Apr9g0816 494 SUPERFAMILY Thioredoxin-like 339 482 IPR036249 -
Apr9g0816 494 CDD PDI_a_PDI_a'_C 375 477 - -
Apr9g0816 494 PRINTS Thioredoxin family signature 50 58 - -
Apr9g0816 494 PRINTS Thioredoxin family signature 58 67 - -
Apr9g0816 494 PRINTS Thioredoxin family signature 103 114 - -
Apr9g0816 494 Gene3D Glutaredoxin 141 244 - -
Apr9g0816 494 ProSiteProfiles Thioredoxin domain profile. 12 141 IPR013766 -
Apr9g0816 494 ProSitePatterns Thioredoxin family active site. 396 414 IPR017937 -
Apr9g0816 494 CDD PDI_b_family 145 240 - -
Apr9g0816 494 ProSiteProfiles Thioredoxin domain profile. 362 482 IPR013766 -
Apr9g0816 494 Pfam Thioredoxin-like domain 168 352 - -
Apr9g0816 494 Gene3D Glutaredoxin 23 140 - -
Apr9g0816 494 ProSitePatterns Thioredoxin family active site. 51 69 IPR017937 -
Apr9g0816 494 SUPERFAMILY Thioredoxin-like 32 142 IPR036249 -
Apr9g0816 494 Gene3D Glutaredoxin 370 484 - -
Apr9g0816 494 Gene3D Glutaredoxin 245 369 - -
Apr9g0816 494 Pfam Thioredoxin 376 479 IPR013766 -
Apr9g0816 494 Pfam Thioredoxin 32 138 IPR013766 -
Apr9g0816 494 PANTHER PROTEIN DISULFIDE-ISOMERASE 8 488 - -
Apr9g0816 494 CDD PDI_a_family 33 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0816 Apr-Chr9 15695697 15701390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0816 K09580 - gmx:100788702 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0816 9 15695697 15701390 Apr9g0816 9 15695697 15701390 ECH