Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0813 ATGTCCGGCTTCACCCGCTCCTCCCAAAGAGCCTCCGTCTCGCCGCTTCGGTCACGGAAGTCGCCGGCGGCAGCTACGAAACCCGGCGGAAGACCTACAACTCCGTCGTCCTCCTCGTCGGCATCGAGGCCATCTCCTAAGGCGTCCGTCTCTCCGTTGGCCGCCGCTACGGCGTCTGACGTCAGCAAGGCGAAGGAGAATGTCACTGTCACCGTCCGGTTTCGACCTCTCAGTGGAAGAGAAATTAATAAGGGGGACGAGGTGGCGTGGTATGCGGATGGGAATCATGTAGTGAGAAATGAATATAATCCTTCCATTGCTTATGGCTTTGATAAGGTATTTGGGCCTGCAACAACAACTCGACATGTTTATGATGTGGCTGCTCAGCATGTTGTCAGTGGTGCCATGGAAGGGATTAATGGTACTGTTTTTGCATATGGTGTTACTAGTAGTGGAAAGACACATACCATGCATGGGGAGCAAAAGTCACCTGGAATTATACCACTTGCAGTGAAGGATGTCTTTAGTATTATACAGGAGACTCCTGGACGAGAGTTCCTACTACGTGTCTCATATCTTGAGATTTACAATGAGGTCATTAATGACTTGCTGGATCCAACGGGGCAGAATCTAAGAATACGAGAGGATGCTCAGGGTACTTATGTTGAAGGAATCAAAGAGGAAGTTGTGCTATCCCCTGCTCATGCCCTTTCTTTGATTGCTACAGGAGAAGAGCATAGACATGTGGGTTCAAATAATTTCAATCTAGTTAGCAGTCGAAGCCACACTATTTTCACCTTGACTATTGAAAGCAGTTCACGAGGGGAAAATATAGGGGAGGAGGATGTGACCTTGTCCCACTTGCACTTAATAGATCTTGCAGGGTCTGAAAGTTCTAAAACCGAAACAACTGGTTTGCGGAGGAAAGAAGGTTCCTATATCAATAAAAGCTTGCTTACACTTGGAACGGTGATTGCTAAACTAACAGATGGGAAGGCAACTCATATTCCTTATCGAGATTCAAAGCTTACTCGTTTGTTACAGTCATCCCTTAGTGGCCATGGGCGGATTTCTCTCATTTGCACAGTTACTCCTTCCTCTAGCAGTAGTGAAGAGACACACAACACGTTAAAATTTGCACACCGGAGTAAGCATGTTGAAATCAAGGCTTCTCAAAATAAGATTATGGATGAGAAGTCTCTCATCAAGAAGTATCAGAGAGAAATTTCTGAGTTAAAACAGGAGCTTCAGCAGTTGAAACGTGGCATGGTTGAGAATCCCAATATGGCCACATCTTCACAAGAAGATCTGGTTAATTTGAAGCTTCAGCTTGAAGCTGGCCAGTCCAAATTGAAGTCAAGATTGGAAGAGGAGGAACAAGCTAAAGCAGCATTGATGGGAAGAATTCAGCGACTAACAAAGTTAATATTAGTTTCTACAAAGAATGCAATGTCATCAAGCATTCCTGAAAGGCCTAGCCATAGGCGAAGGCATTCTTTTGGGGAAGATGAGCTAGCATATTTGCCAGATAAAAAACGTGACACCTGGTTTAATGAGGGCACCGGGAGCCACACGTCAGTTCCTTCAGCAGAAGAAAAGGATGATGTTACCAATTTAGAAGAATTGGGGAAGGATTATAAAAGGAGCAAAAGGCGTGGAATGCTTGGTTGGTTGAAGCTGAGAAAACCTGATAGTCTTGATGGATTATCGTCAAATGCTGATAGTGAGGGCTCTGCAAATGGGTCACCTGCATCTGCTTCAAAATCAACTCCAAACAGAGTTACGCTTTCTGACATGAAAGATTCACGCAGGAATTCTGTCAGCAGAAAGGATAATGCCTCAGCTCTTAATTCTTTTCCAGGAAGAACTCAAGCAGGTGACTTGTTCAGTGTAACTGTTGGAGGTCGTCAACTTCCTCCGACTGGGACTACTGTTACAGATCAAATGGATCTTCTGCGTGAACAAGTAAAAATGTTGGCTGGAGAGGTGGCATTGTGTATTAGTTCTCTGAAAAGACTGTCTGAACAAGCAATTATCAAGCCTGAAGATATCCAATTACAAGCAGACATGCATAAGTTGAAGGGTGAAATTAGCCAAAAGAAGAATCAAATCCGTATCCTGGAGCAACGGATGATTGGATCACTTGGACATGCACCAAGTAACAGTGAAATGTCGCAGGCTTTATCCAAGCTTACTAGTGAGCTCAATGAAAAAATTTTTGAACTTGAGATCAAGTCTGCAGATAATAGGATACTTCAAGATCAACTACAGTTGAAGAATTCAGAGAATGCTGAGATGCAAGAGACAATTATTTCACTAAAGAAACAGATAAATTTGTTGCTCGATAAAACCTCAGCTAATTCTCAGCAGGTTGCTGATGGTGAGGCCGATTCTTCTACAGAGATATTGGGAAAGACTGATGAAGCATGGCCAGTCAAGAACTCAAATTCAATAGTTTCTCAAGCACACTCCAAGCAAGGAAGTAGTGAATCTATTATAAATTCTCAAATTCTTATGCAGGCAGCTGAAATAGAGAATTTAAGGCAAGAGAATGTGAGATTGTTTGAAGAGAAAGATGGGCTTGAAATTCAAAGCCAGAAGCTTGCAGAGGAAGCTTCATATGCAAAAGAGTTGGCAGCAGCTGCAGCAGTTGAACTCCGAAACCTGGCTGAAGAAGTAACTAAACTTACTTATGAAAATGCAGAACTGACTGGTGATCTGGCAGCTGCAAAAGAGGTCTCTTGCAAATCTAACTTTTCTTCAATATCTTCCTTATATGACTGCAAGCAAAATATTAATAATAGTTTTCAACGAGATGCACAATCGAAAAGGCTGGGGAATGAAGTTCTTATTGAGGAGTTGCAGAAGGACCTTAATGCTAGATTCCAAAGAGAAGCTGCATTAGAAGCAGCTTTATCTGTGAAAGATGAAATAGAAGCTGACTTAAGAAGGACAGTTGATGAAATAAAATACCAAAAACAAGATTTGGAATATGAGCTTGCAAGCATGCGGATGCTGGTAGCAAAGATGAGAAAGTCTGGAATTAATGTCGAGGATAAGTCAACATTTCTTATGCCCATTGATATACAAACCAAGGTTAAAACTGGACTTCCAACATCTAATGGCTACTCTCATAGAAAACAGTACAAAGAGGATGAGACTTTAGGAAGCATTGAAGATATGATTGCATTAGAAGAACTGAGGGCTAATTATGAAAGCGAAAGAAGAAGATGCAATGAACTAGAAAGTCATATTTCTATATTGAAGGGTGAAGATATCGATGCTCTGGATGTTATGGCCCTTGAGGAGCTTCAAAACCTTCATATTGAGGCAATAACAAAGATTTGCCATGCAAAGTATGCAAATCAAAACCTGTAG 3378 0.4216 MSGFTRSSQRASVSPLRSRKSPAAATKPGGRPTTPSSSSSASRPSPKASVSPLAAATASDVSKAKENVTVTVRFRPLSGREINKGDEVAWYADGNHVVRNEYNPSIAYGFDKVFGPATTTRHVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGEQKSPGIIPLAVKDVFSIIQETPGREFLLRVSYLEIYNEVINDLLDPTGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIATGEEHRHVGSNNFNLVSSRSHTIFTLTIESSSRGENIGEEDVTLSHLHLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIAKLTDGKATHIPYRDSKLTRLLQSSLSGHGRISLICTVTPSSSSSEETHNTLKFAHRSKHVEIKASQNKIMDEKSLIKKYQREISELKQELQQLKRGMVENPNMATSSQEDLVNLKLQLEAGQSKLKSRLEEEEQAKAALMGRIQRLTKLILVSTKNAMSSSIPERPSHRRRHSFGEDELAYLPDKKRDTWFNEGTGSHTSVPSAEEKDDVTNLEELGKDYKRSKRRGMLGWLKLRKPDSLDGLSSNADSEGSANGSPASASKSTPNRVTLSDMKDSRRNSVSRKDNASALNSFPGRTQAGDLFSVTVGGRQLPPTGTTVTDQMDLLREQVKMLAGEVALCISSLKRLSEQAIIKPEDIQLQADMHKLKGEISQKKNQIRILEQRMIGSLGHAPSNSEMSQALSKLTSELNEKIFELEIKSADNRILQDQLQLKNSENAEMQETIISLKKQINLLLDKTSANSQQVADGEADSSTEILGKTDEAWPVKNSNSIVSQAHSKQGSSESIINSQILMQAAEIENLRQENVRLFEEKDGLEIQSQKLAEEASYAKELAAAAAVELRNLAEEVTKLTYENAELTGDLAAAKEVSCKSNFSSISSLYDCKQNINNSFQRDAQSKRLGNEVLIEELQKDLNARFQREAALEAALSVKDEIEADLRRTVDEIKYQKQDLEYELASMRMLVAKMRKSGINVEDKSTFLMPIDIQTKVKTGLPTSNGYSHRKQYKEDETLGSIEDMIALEELRANYESERRRCNELESHISILKGEDIDALDVMALEELQNLHIEAITKICHAKYANQNL* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0813 1125 MobiDBLite consensus disorder prediction 1 62 - -
Apr9g0813 1125 Coils Coil 886 906 - -
Apr9g0813 1125 MobiDBLite consensus disorder prediction 30 47 - -
Apr9g0813 1125 MobiDBLite consensus disorder prediction 1 16 - -
Apr9g0813 1125 SMART kinesin_4 65 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0813 1125 PRINTS Kinesin heavy chain signature 138 159 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0813 1125 PRINTS Kinesin heavy chain signature 252 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0813 1125 PRINTS Kinesin heavy chain signature 287 305 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0813 1125 PRINTS Kinesin heavy chain signature 336 357 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0813 1125 MobiDBLite consensus disorder prediction 565 621 - -
Apr9g0813 1125 Coils Coil 388 422 - -
Apr9g0813 1125 MobiDBLite consensus disorder prediction 568 596 - -
Apr9g0813 1125 CDD KISc_CENP_E 67 386 - -
Apr9g0813 1125 Gene3D Kinesin motor domain 57 418 IPR036961 -
Apr9g0813 1125 Coils Coil 448 475 - -
Apr9g0813 1125 Coils Coil 749 783 - -
Apr9g0813 1125 ProSitePatterns Kinesin motor domain signature. 286 297 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr9g0813 1125 Coils Coil 1061 1091 - -
Apr9g0813 1125 PANTHER KINESIN-LIKE PROTEIN KIN-7C, MITOCHONDRIAL 52 1111 - -
Apr9g0813 1125 MobiDBLite consensus disorder prediction 518 538 - -
Apr9g0813 1125 Coils Coil 844 871 - -
Apr9g0813 1125 PANTHER CENTROMERE PROTEIN E 52 1111 - -
Apr9g0813 1125 Coils Coil 690 710 - -
Apr9g0813 1125 Pfam Kinesin motor domain 73 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0813 1125 ProSiteProfiles Kinesin motor domain profile. 67 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr9g0813 1125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 421 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0813 Apr-Chr9 15614386 15633328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0813 63 712 Miscellaneous Gene Families AT5G06670 60.153 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0813 K11498 - gmx:100817131 1880.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0813 9 15614386 15633328 Apr9g0813 9 15614386 15633328 ECH