Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0809 ATGGAATTGTCTATAAAATTAGAAAAATTAAGACAACTTGAACTTCACTTACTACTTCTTGTGATGGCTTTTGGCACTGCCCATGGTGGTAATGTCACTTACGATAGAAGATCCTTGATCATTGATGACCAACATAGAATCCTCTTCTCTGGTTCAATCCATTATCCTCGTAGTACTCCTGAGATGTGGCCTTCTTTAATTGCGAAAGCTAAGGAAGGAGGATTAGATGTAATACAAACCTACGTGTTTTGGAACCTACACGAACCGCTACAAGGCCAGTATGATTTCAGGGGACGGCGTGACTTAGTGAGATTCATTAAGGAAATCCAAGCACAGGGTTTATATGTGACCCTCAGAATTGGACCATTCATTGAGAGTGAATGGACTTACGGGGGTCTGCCACTTTGGTTGCATGATATTCCCGGCATTATTTTTAGATCAGACAATGAGCCATTCAAGCTTCAAATGCAAAACTTCACTGCCAAAATGGTAAACATGATGAAATTAGCCAATCTTTATGCTTCACAAGGAGGGCCCATCATACTATCACAGATTGAGAACGAGTATGGTACTGTTGAAAGGGCGTTTCATGAGAGTGGAGTCAGTTATATTCATTGGGCTGCACAAATGGCCGTGGGACTCCAAACTGGGGTGCCTTGGATCATGTGCAAGCAAGATGATGCTCCTGATCCTGTGATCAACACATGCAATGGTCTGAGATGCGGGAAAACATTTGCAAGGCCTAACTCACTTAACAAGCCATCACTATGGACAGAGAATTGGACATCTCGATATCCAGCCTTTGGTGAAGAGACACGCTTGAGATCAGCGGAAGACATTGCATATAATGTTGCCTTGTTCATTGCAAAAAACGGAAGCTATGTCAACTACTACATGTACCATGGAGGAACCAACTTTGACAGAACAGCTTCTGCTTTTGTAACAACAGCATATTATGATGATGCCCCATTAGATGAATATGGTTTGGTTAGGCAACCAAAATGGGGGCATCTAAGGGAACTACATGCTGCAATTAAGGCATGTTCGGAGACTTTACTGTATGGTACACAAACTCCATTCAACTTGGGTAGACAACAAGCTTATGTTTTCAAAAGGAATGCAACAGAATGTGCAGCCTTGTTGGAAAATAGTGCTAATAGAGAAGCCACAGTCCAATTTCAAAATGTTACATATCAGTTACCCCCTCAATCATTCAGTATCCTACCTGACTGCAAAAATGTGGCCTTCAACACAGCCAAGGTAAGCGTACCACATAATACCAGAACAATGATGTCACAGTCAAAGTTCAGTTCATCTGAAAAGTGGAAAGTGTACAATGAAGCCATCCCCAACTATGATGATACTTCATTAAGAGAAAACAAGATATTGGATCAAATCAGCTCCGCGAAAGATACTTCTGACTATCTATGGTATACTTACAGAATAGATACTAACTCTCTTAATGCTCAGTCAGTTCTTAGTGTATTCAGCAGAGGACATGTTCTGCATGCATTTGTCAACGAAGTATTAGTAGGTTCAGCACATGGCAGTCACAAAAATTCAAATTTCAACATGGAGATCAAGATCAATTTGAGAGAAGGGGAGAACAATATTTCCTTACTCAGTGCAACAGTTGGATTGCCGGATTCGGGAGCACATCTAGAGCGCAGAGCAGCTGGTTTGTATAAGGTCACAATTGATGGCAGAGATCTCACTCATCAATCATGGGGATATCAGGTTGGATTGCTAGGAGAAAAATTGCAAATATATACAGCTATTGGATCAAGTAAAGTTCAGTGGAAAAGTCTTGGAAACTCTACTAATCCACTCACATGGTATCAGACAACATTCGATGCACCAGCAGGAAACGATCCTGTAGCACTTGACCTTAGTTCAATGGGAAAGGGTCAAGCTTGGGTTAATGGCCAAAACATTGGCCGTTATTGGGTATCTTTCCACACACCAAAGGGGAATCCAACACAGCAATGGTACCACATACCTCGATCTTTCTTGAAATCCAATGGGAACATTCTAGTTCTATTTGAAGAAGAAACTGGAAACCGACTAAGAATAACTCTGGACACAATTTACTCTACAGTGAACTCAATAGTCAAGAAGAACACTTAA 2127 0.4114 MELSIKLEKLRQLELHLLLLVMAFGTAHGGNVTYDRRSLIIDDQHRILFSGSIHYPRSTPEMWPSLIAKAKEGGLDVIQTYVFWNLHEPLQGQYDFRGRRDLVRFIKEIQAQGLYVTLRIGPFIESEWTYGGLPLWLHDIPGIIFRSDNEPFKLQMQNFTAKMVNMMKLANLYASQGGPIILSQIENEYGTVERAFHESGVSYIHWAAQMAVGLQTGVPWIMCKQDDAPDPVINTCNGLRCGKTFARPNSLNKPSLWTENWTSRYPAFGEETRLRSAEDIAYNVALFIAKNGSYVNYYMYHGGTNFDRTASAFVTTAYYDDAPLDEYGLVRQPKWGHLRELHAAIKACSETLLYGTQTPFNLGRQQAYVFKRNATECAALLENSANREATVQFQNVTYQLPPQSFSILPDCKNVAFNTAKVSVPHNTRTMMSQSKFSSSEKWKVYNEAIPNYDDTSLRENKILDQISSAKDTSDYLWYTYRIDTNSLNAQSVLSVFSRGHVLHAFVNEVLVGSAHGSHKNSNFNMEIKINLREGENNISLLSATVGLPDSGAHLERRAAGLYKVTIDGRDLTHQSWGYQVGLLGEKLQIYTAIGSSKVQWKSLGNSTNPLTWYQTTFDAPAGNDPVALDLSSMGKGQAWVNGQNIGRYWVSFHTPKGNPTQQWYHIPRSFLKSNGNILVLFEEETGNRLRITLDTIYSTVNSIVKKNT* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0809 708 Gene3D Glycosidases 27 349 - -
Apr9g0809 708 PANTHER BETA-GALACTOSIDASE 16 697 - -
Apr9g0809 708 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 PRINTS Glycosyl hydrolase family 35 signature 256 271 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 PRINTS Glycosyl hydrolase family 35 signature 293 308 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 PRINTS Glycosyl hydrolase family 35 signature 312 328 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 PRINTS Glycosyl hydrolase family 35 signature 608 622 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 PRINTS Glycosyl hydrolase family 35 signature 635 651 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 Gene3D - 439 578 - -
Apr9g0809 708 Pfam Beta-galactosidase jelly roll domain 610 680 IPR025300 -
Apr9g0809 708 Gene3D - 580 706 - -
Apr9g0809 708 SUPERFAMILY Galactose-binding domain-like 575 699 IPR008979 -
Apr9g0809 708 SUPERFAMILY Galactose-binding domain-like 406 562 IPR008979 -
Apr9g0809 708 PANTHER BETA-GALACTOSIDASE RELATED 16 697 IPR001944 GO:0004553|GO:0005975
Apr9g0809 708 SUPERFAMILY (Trans)glycosidases 29 348 IPR017853 -
Apr9g0809 708 Pfam Glycosyl hydrolases family 35 38 344 IPR031330 -
Apr9g0809 708 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Apr9g0809 708 Pfam Beta-sandwich domain in beta galactosidase 352 421 IPR041392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0809 Apr-Chr9 15529182 15551521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0809 15 696 Glycoside Hydrolase AT5G63800 59.195 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0809 - - gmx:100789220 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0809 9 15529182 15551521 Apr9g0809 9 15529182 15551521 ECH