Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0770 ATGAAGGTGACATGGAAGAACGACAATAACAAGAAGAAGCGTTGTTTACCTACGTTGTCACACTTCACTGACCATCCATTTGAGCACCATCAACAACACCCCAACAACGACACTCCCAATTCTGACCAATCCCACACAACACAACTTGCTACTGAATTCCAAGCTCAAGGAGACAAGCTTGCTATGGATGGGAAATATCGGGAAGCACTTGGTAAATGGGAAGCTGCTCTTGCGTTGGCACCTGATGTTCCAGTTTTGCATGAACAAAAGGCCCAAGTTTTACTTGAAATTGGAGATGCTTGGAATGCTTTAAAGGCTGCAACTCGAGCTACTGAATTGCAACCATCATGGGCTGAGGCATGGGTCACACTTGGCAGAGCACAGCTGAATTTTGGTGAACCGGATAATGCTATTGAAAGCTTTGACAGAGCTTTAGCTCTCAAGCCTGAGTATGAGGAAGCTCAAGATGATAGGAAAACTGCATTACATCTAGTAAAGAAGAGAAAGCAACTTCATTCATCAGGACTGAGTGCCACTCAAAATCGTTATGTGGTTGGCGATAAGGATGAAAAATCGTGA 579 0.4404 MKVTWKNDNNKKKRCLPTLSHFTDHPFEHHQQHPNNDTPNSDQSHTTQLATEFQAQGDKLAMDGKYREALGKWEAALALAPDVPVLHEQKAQVLLEIGDAWNALKAATRATELQPSWAEAWVTLGRAQLNFGEPDNAIESFDRALALKPEYEEAQDDRKTALHLVKKRKQLHSSGLSATQNRYVVGDKDEKS* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0770 192 Pfam Tetratricopeptide repeat 90 150 - -
Apr9g0770 192 ProSiteProfiles TPR repeat profile. 118 151 IPR019734 GO:0005515
Apr9g0770 192 MobiDBLite consensus disorder prediction 1 52 - -
Apr9g0770 192 MobiDBLite consensus disorder prediction 33 52 - -
Apr9g0770 192 PANTHER OSMOSIS RESPONSIVE FACTOR 1 191 - -
Apr9g0770 192 MobiDBLite consensus disorder prediction 1 32 - -
Apr9g0770 192 Gene3D Tetratricopeptide repeat domain 40 184 IPR011990 GO:0005515
Apr9g0770 192 SMART tpr_5 84 117 IPR019734 GO:0005515
Apr9g0770 192 SMART tpr_5 118 151 IPR019734 GO:0005515
Apr9g0770 192 SMART tpr_5 50 83 IPR019734 GO:0005515
Apr9g0770 192 SUPERFAMILY TPR-like 48 169 IPR011990 GO:0005515
Apr9g0770 192 MobiDBLite consensus disorder prediction 168 192 - -
Apr9g0770 192 ProSiteProfiles TPR repeat region circular profile. 118 150 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0770 57 162 EF-hand Containing Proteins AT2G32450 31.132 6.31e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0770 - - pvu:PHAVU_001G066600g 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0770 9 14096097 14100275 Apr9g0770 9 14096097 14100275 ECH