Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0765 ATGGATTCGGGTCTTTGTTTGGTGTCTTCACTGAATCACCAAGAGGTTCAAAGTCGTTTCTTTGACCCATCTTGGTTACAAACGCAGTCCCACGTTCCCATGAACTTCGTTTGGCCAAAGGAATGTCTAGCGGACGCCAATGAAGAATTCCAAGCTCCATTGGTAGACCTTGAAGGGTTCCTAAGAGGTGATGATGAGGCCACACACTCTGCTGTTAAGCTCCTACGCAAAGCATGCTCAACTCATGGATTTTTCCAAGTGATCAATCATGGGGTTGATTCACTCCTAATTGATGAAGCTTATGATCAAATGGACGCTTTTTTTAAGCTCCCAATTCACAGGAAACTATGTGTTCGCAAGAAAGCAGGTTCGATGTGGGGTTATTCTGGTGCCCATGCTGACCGGTTTTCCTCCAAATTGCCATGGAAGGAGACCTTATCTTTCCCCTTCCATGACAAAACCTTAGAACCAGTTGTCACCAATTACTTTAACTCCACTTTAGGGAAAGACTTCGATGACGCTGGGGTGGGATTCCAAAAGTACTGTGAAGCTATGAAGGAGTTGGGAATGAAGCTGTTGGAGCTTTTGGCTACTAGCTTGGGAGTGGATAAGTTGAGTTATAAGGACATGTTTGAAGATGGTTGTTCCATCATGAGATGTAACTACTACCCATCATGCCAGGAACCAAGTCTTGCACTAGGGACGGGACCGCATTGTGACCCAACATCACTAACCATACTTCACCAAGATCAAGTTGGAGGCCTTGATGTGTTTTCAGACAACAAGTGGCAGACGGTTAGACCTCGTCATGATGCCCTTGTAGTTAACATTGGTGACACTTTCACGGCATTATCAAATGGAAGATACAAGAGTTGCCTACATAGGGCGGTGGTTAACAAGTACAAAGAGAGGAGGTCCTTGGCATTCTTTCTGTGCCCAAAAGAGGACAAAATGGTGAGAGCCCCAGAGGATATTGTGCGTAGGGATGGGACAAAACAGTATCCAGATTTCACGTGGTCTAATTTGCTTGAATTCACACAAAAGTACTACAGAGCCGACGAAGCTACACTGCAAAATTTCACCAAGTGGTTACTATCCTCCAAACTACAAATTAACCCTTTAAGTTAA 1128 0.445 MDSGLCLVSSLNHQEVQSRFFDPSWLQTQSHVPMNFVWPKECLADANEEFQAPLVDLEGFLRGDDEATHSAVKLLRKACSTHGFFQVINHGVDSLLIDEAYDQMDAFFKLPIHRKLCVRKKAGSMWGYSGAHADRFSSKLPWKETLSFPFHDKTLEPVVTNYFNSTLGKDFDDAGVGFQKYCEAMKELGMKLLELLATSLGVDKLSYKDMFEDGCSIMRCNYYPSCQEPSLALGTGPHCDPTSLTILHQDQVGGLDVFSDNKWQTVRPRHDALVVNIGDTFTALSNGRYKSCLHRAVVNKYKERRSLAFFLCPKEDKMVRAPEDIVRRDGTKQYPDFTWSNLLEFTQKYYRADEATLQNFTKWLLSSKLQINPLS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0765 375 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 213 313 IPR005123 -
Apr9g0765 375 Pfam non-haem dioxygenase in morphine synthesis N-terminal 53 153 IPR026992 -
Apr9g0765 375 Pfam 2OG-Fe(II) oxygenase superfamily 216 313 IPR044861 -
Apr9g0765 375 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 367 - -
Apr9g0765 375 PANTHER GIBBERELLIN 20-OXIDASE 12 367 - -
Apr9g0765 375 PRINTS Isopenicillin N synthase signature 75 92 - -
Apr9g0765 375 PRINTS Isopenicillin N synthase signature 238 259 - -
Apr9g0765 375 PRINTS Isopenicillin N synthase signature 273 299 - -
Apr9g0765 375 SUPERFAMILY Clavaminate synthase-like 25 352 - -
Apr9g0765 375 Gene3D - 25 345 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0765 Apr-Chr9 13863126 13866268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0765 30 351 Glycosyltransferase AT5G59530 28.869 1.90e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0765 K05282 - gmx:100801187 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0765 9 13863126 13866268 Apr9g0765 9 13863126 13866268 ECH