Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0747 ATGGTGAAGGAAACAGAGTACTACGATATTCTCGGACTCACTCCCTCTGCCTCCGAAGACCAAATTCGCAAGGCCTATTATCATAAGGCAATGCAAGTTCATCCTGATAAAAACCCAAACGATCCTCGTGCCGCCGAAAAGTTCCAGATTTTGGGTGAAGCTTACCAAGTTTTGAGTGATCCGGTGCAAAGGAATGCGTACAATCATAATGGGAAGCGTTCTGTATCTAGGGAAACTATGCTTGACCCAATGGCTGTCTTCGCCCTGCTCTTTGGAAGTGAACTGTTTGAGGATTACGTAGGGCATCTAGCTGTGGCATCAATGGCTTCTTCCGAGCTAGCTGATGAAAGTGAGGATCCAGATAAATTGCATGAAAAATTAAAGGCTGTCCAAAAAGAAAGGGAAGAAAAGCTAGCACGATTTTTGAAAGATTTTCTTGGCCAATATGTCCGTGGTGACAAAAAGGGATTCTTCCAACGTGCAGAATCTGAAGCAAGACGGCTTTCTCATGCCGCCTTTGGAGTTGATATGTTACATACGATCGGCTACGTATATTCAAGACAGGCAGCACAAGAACTAGGGAAAAAAGCCATTTATCTTGGAGTGCCATTTCTTGCTGAATGGGTACGCAATAAAGGACATTTCTGGAAGTCACACTTCACAGCTGCTAAAGGTGCTTATCAGTTACTTCAGCTTCAAGAAGACATCCGCAAGCAATTTAAAATGGATGGTAGTGGTCTGGAAAACGATGTTGATTCTCATATTCGTCTTAATAAAGATACATTGATGAATTCGTTGTGGAAGTTAAATGTGATGGACATAGAAGTAACCCTTGTACACGTGTGTCAAATGGTGCTAAAGGAAAATAATGTTAGGAAAGAGGAACTTAAAGTTCGGGCTACCGCTCTTAAAATTCTTGGGAAGATATTTCAGGACAAGAATTCAAAAGGAGAAACATTGAAGAAGAAGATTGCTGCTGATTCTGATGACGAAGGAAGCAGTAGTGATTCTTCGGAGGATGAATCGCCTAGAGCAATTTCCTATCGAACTCCCTTTTTTACTCAGGGTATCGGTAGGCTCTTCAAATGCCTCTGTAATCCAGCATTTGATGTGGATGATGAAGAGATAGTTTACAAAATCAAATGA 1146 0.4171 MVKETEYYDILGLTPSASEDQIRKAYYHKAMQVHPDKNPNDPRAAEKFQILGEAYQVLSDPVQRNAYNHNGKRSVSRETMLDPMAVFALLFGSELFEDYVGHLAVASMASSELADESEDPDKLHEKLKAVQKEREEKLARFLKDFLGQYVRGDKKGFFQRAESEARRLSHAAFGVDMLHTIGYVYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSHFTAAKGAYQLLQLQEDIRKQFKMDGSGLENDVDSHIRLNKDTLMNSLWKLNVMDIEVTLVHVCQMVLKENNVRKEELKVRATALKILGKIFQDKNSKGETLKKKIAADSDDEGSSSDSSEDESPRAISYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYKIK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0747 381 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Apr9g0747 381 Pfam DnaJ domain 6 68 IPR001623 -
Apr9g0747 381 PRINTS DnaJ domain signature 8 26 IPR001623 -
Apr9g0747 381 PRINTS DnaJ domain signature 26 41 IPR001623 -
Apr9g0747 381 PRINTS DnaJ domain signature 43 63 IPR001623 -
Apr9g0747 381 MobiDBLite consensus disorder prediction 321 343 - -
Apr9g0747 381 CDD DnaJ 6 60 IPR001623 -
Apr9g0747 381 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Apr9g0747 381 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 365 - -
Apr9g0747 381 Gene3D DnaJ domain 1 85 IPR036869 -
Apr9g0747 381 Pfam X-domain of DnaJ-containing 131 315 IPR026894 -
Apr9g0747 381 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Apr9g0747 381 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 365 - -
Apr9g0747 381 SMART dnaj_3 5 63 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0747 Apr-Chr9 13284918 13289447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0747 7 81 Miscellaneous Gene Families AT1G16680 42.857 2.92e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0747 - - gmx:100793811 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0747 9 13284918 13289447 Apr9g0747 9 13284918 13289447 ECH