Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0729 ATGCAGATTCAAACCTGCCACTCCTTCACCACCAGAACTCTTCCACTTGCCAGCCACCGAAAGCACCGCCACCTCATGCGGCCACTGAAATCTGCCATGGCCAGTGCCACACCACCGGTGCTGAAGGCACGGAGGACTCACTCTATGCCGCCGGAAAAGCTAGAGGTTTTCAAGTCAATGGAGGGCTGGGCCTCACAGTGGGTGCTACCACTACTGAAGCCCGTGGAGCAATGCTGGCAGCCACAAAGCTTAGTCCCTGACTCCTCGTTGCCGTTTGAAGAATTCACCGATCAGGTGAAGGCTCTTCGAGACCGCACCAAGGAGCTACCCGACGAGTACTTCGTAGTTCTTGTGGGTGATATGGTCACGGAAGACGCGCTTCCCACTTACCAGACCATGATCAACAACCTGGATGGGGTGAGAGATGACTATGGAACAAGCCCAAGCCCGTGGGCTGTGTGGACCCGGGCCTGGACCGCTGAAGAAAATAGACACGGGGATTTGCTCAGAACGTATTTGTATCTGTCTGGTCGAGTTGACATGGCCAAGATCGAGAAGACCGTTCATTACCTCATTGCAGCTGGCATGGACCCTGGAACGGAGAACAACCCATATTTGGGGTTTGTGTACACGTCATTCCAAGAGCGAGCAACGTTCGTGGCACACGGTAACACGGCTCGGCTGGCAAAGGAGGGGGGTGATCCGGTGCTTGCACGCATATGCGGGACCATTGCTGCGGACGAGAAACGACACGAGAATGCCTACTCCAGGATCGTGAAGAAGCTTCTAGAAGTGGATCCCACAGGGGCAATGGTGGCCATAGGAGACATGATGGAGAAGAAGATCACGATGCCGGCACACCTTATGTACGATGGGGAGGACCCCAGGCTATTTGAGCACTATTCTGCAGTGGCACAACGTATGGGCGTTTACACGGCCAATGACTATGCGGACATTTTGGAGTTTCTGATCGGACGGTGGAAATTGGAGATGCTTGAAGGTTTGACGGCTGAGGGAAAGAGGGCGCAGGATTTTGTTTGCGGGTTACCGCCGAGGATTAGGAGGTTGCAGGAGCGAGCCGAAGAGCGAGCGCGTAAGATGAAGCCGCATGGCGTGAAGTTCAGCTGGATCTTCAATAAGGAGTTGCTTTTGTGA 1155 0.5437 MQIQTCHSFTTRTLPLASHRKHRHLMRPLKSAMASATPPVLKARRTHSMPPEKLEVFKSMEGWASQWVLPLLKPVEQCWQPQSLVPDSSLPFEEFTDQVKALRDRTKELPDEYFVVLVGDMVTEDALPTYQTMINNLDGVRDDYGTSPSPWAVWTRAWTAEENRHGDLLRTYLYLSGRVDMAKIEKTVHYLIAAGMDPGTENNPYLGFVYTSFQERATFVAHGNTARLAKEGGDPVLARICGTIAADEKRHENAYSRIVKKLLEVDPTGAMVAIGDMMEKKITMPAHLMYDGEDPRLFEHYSAVAQRMGVYTANDYADILEFLIGRWKLEMLEGLTAEGKRAQDFVCGLPPRIRRLQERAEERARKMKPHGVKFSWIFNKELLL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0729 384 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 24 383 - -
Apr9g0729 384 SUPERFAMILY Ferritin-like 40 383 IPR009078 -
Apr9g0729 384 Pfam Fatty acid desaturase 52 378 IPR005067 GO:0006631|GO:0045300
Apr9g0729 384 PIRSF Dlt9_acylACP_des 5 384 IPR005067 GO:0006631|GO:0045300
Apr9g0729 384 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 24 383 IPR005067 GO:0006631|GO:0045300
Apr9g0729 384 CDD Acyl_ACP_Desat 52 360 IPR005067 GO:0006631|GO:0045300
Apr9g0729 384 Gene3D Ribonucleotide Reductase, subunit A 38 384 IPR012348 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0729 Apr-Chr9 12880373 12882114 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0729 31 382 Acyl Lipid Metabolism Gene Families AT1G43800 75.989 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0729 K03921 - gmx:100037478 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0729 9 12880373 12882114 Apr9g0729 9 12880373 12882114 ECH