Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0723 ATGAGGGGACCCTCCCCAAGCACCGTCGAGCCGCGCCACCGCTCCTCCTCTTCATTTAGTGAAGATACTAACAAGAGAAGGCATCAAAGAAGTAAAGATTTTAAAGATGTAGAGAAGGCATTGCATATTCCATTCCAAGATAGGAGTATAAATTGCAAGCCAAATTGGAAATTAGTTTTGGTTATTGTTATATTGGGAACTTTAGTTACAATTTTCCACCCACCAGCTGTTTATAATACTGATCATCTATCACAGTCTATATCACGGCCGACTTTCATTAGGAACTGGAAAGGAGCTATTGATGGCATTGATTCATGTTATGTATCCTTTCTAAATATTGAGTGGGACCAAATAACTAAAGTTCTTGCAAATTTGAAGGATAAGGACACTTATCAGGGTGTTGGCTTATTAAACTTCAACGACAGTGAGATTGACCTCTGGAAGCAGTTGGTACCAGAAGCAGAGCATGTAGTCCTTTACCTGAACTATGCTTCAAATAATATTACTTGGGAAGTCCTGTATCCAGAATGGATAGACGAAGAAGAAGAATATGAGTTCCCTACTTGTCCAACTCTACCTAGGATTCAGGGACCAGGAAAACCACGGCTTGATCTTATTGCTGTCAAGCTTCCCTGCAACAAGTCAGGGCGCTGGTCAAGAGATGTAGCTCGTTTGCACCTGCAGATTGAAGCTGCAAGATTTGCTGCTTTTTCCAAAGGATATCATCCAGTGCATGTGCTTTTGGTGACTGATTGCTTCCCAATCCCAAATCTCTTTACCTGCAAGGAACTTATAAAACGGGAAGGGAGTGCCTGGCTTTATGCACCTAACCTGAATACACTGAGGGAGAAGCTGCAGCTGCCAATTGGTTCATGTGAACTAGCGGTTCCTTTGAAGGCTAAAGAAAATTTTTACTCAGAAAGGCCACGCCGAGAAGCTTATGCAACCATCCTGCATTCTGCACACATGTATGTTTGCGGAGCCATTACTGCAGCTCAGAGTATTCGGATGGCTGGATCAACACGAGATCTAGTGATTCTCGTTGATGAAACAATTAGTGACTATCATAGGGGTGGCTTGGAGGCTGCTGGATGGAAGATCCATACAATCCAAAGAATCAGGAATCCAAAAGCAGAACCAGAGGCATATAATGAGTGGAATTATAGCAAATTCCGTCTCTGGCAGCTAACAGATTATGACAAAATAATTTTCATTGATGCTGACCTTCTTATACTAAGAAATATTGATTTTCTTTTCGAGATGCCTGAAATATCAGCCATCGGAAACAATGCTACACTGTTCAACTCTGGTGTAATGGTGGTTGAACCATCAAATTGTACGTTTCAACTGCTTATGGATCACATCAACGAGATTGTCTCATACAATGGTGGAGACCAAGGGTATCTGAATGAAATTTTCACGTGGTGGCATCGGATTCCAAAACATATGAATTTCTTAAAGCACTTTTGGGAAGGTGATGAGGAAGAGAAGAAAGTTATGAAAACTCATCTCTTCGGAGCTTATCCACCAATACTTTATGTGATCCACTATCTGGGCTACAAACCATGGCAGTGCTTCCGAGACTATGACTGCAACTGGAATGTGGCCATTCTGCAGGAGTTTGCAAGTAACGTAGCTCATGCAAGGTGGTGGAAGGTGCATGATGCCATGCCAGAAAACTTACAGAAGTTTTGTTTGCTTAGGTCCAAGCAGAAGGCTGCACTAGAGTGGGATCGTAGACAAGCAGAAAAAGGAAACTACAGTGATGGTCACTGGAAAATTAAGATAAAAGACTCACGTTTGAAAACATGCTTCGAGGATTTCTGCTTCTGGGAGAGCATGTTATGGCATTGGGGTGAAAAGAATTGGACAGATAATTCTACTGTTAACAATTCGCCTCCTGCTGTTAAAATCAAATCTCTCTCTTTTTTATGA 1935 0.4181 MRGPSPSTVEPRHRSSSSFSEDTNKRRHQRSKDFKDVEKALHIPFQDRSINCKPNWKLVLVIVILGTLVTIFHPPAVYNTDHLSQSISRPTFIRNWKGAIDGIDSCYVSFLNIEWDQITKVLANLKDKDTYQGVGLLNFNDSEIDLWKQLVPEAEHVVLYLNYASNNITWEVLYPEWIDEEEEYEFPTCPTLPRIQGPGKPRLDLIAVKLPCNKSGRWSRDVARLHLQIEAARFAAFSKGYHPVHVLLVTDCFPIPNLFTCKELIKREGSAWLYAPNLNTLREKLQLPIGSCELAVPLKAKENFYSERPRREAYATILHSAHMYVCGAITAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEISAIGNNATLFNSGVMVVEPSNCTFQLLMDHINEIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEEEKKVMKTHLFGAYPPILYVIHYLGYKPWQCFRDYDCNWNVAILQEFASNVAHARWWKVHDAMPENLQKFCLLRSKQKAALEWDRRQAEKGNYSDGHWKIKIKDSRLKTCFEDFCFWESMLWHWGEKNWTDNSTVNNSPPAVKIKSLSFL* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0723 644 MobiDBLite consensus disorder prediction 15 33 - -
Apr9g0723 644 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED 14 625 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Apr9g0723 644 Pfam Glycosyl transferase family 8 318 524 IPR002495 GO:0016757
Apr9g0723 644 MobiDBLite consensus disorder prediction 1 33 - -
Apr9g0723 644 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 310 560 IPR029044 -
Apr9g0723 644 SUPERFAMILY Nucleotide-diphospho-sugar transferases 312 562 IPR029044 -
Apr9g0723 644 CDD GT8_Glycogenin 312 557 - -
Apr9g0723 644 PANTHER GLYCOGENIN SUBFAMILY MEMBER 14 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0723 Apr-Chr9 12556413 12560566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0723 4 620 Glycosyltransferase AT1G77130 68.218 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0723 K20890 - gmx:100787339 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0723 9 12556413 12560566 Apr9g0723 9 12556413 12560566 ECH