Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0697 ATGGTCTCTGCAACAAACCCTAACCCTAAAAATGTGTACCACATCGGAGGTCTGCAAGTGGAATTTCCCTACCAACCGTACGGGTCTCAATTTGCATTTATGGGCAGAGTAATCTCCACCCTTAACCGAGCTCAGAGAGAAGGCCATTGTCACGCTTTGCTCGAGTCTCCAACTGGCACTGGCAAGTCCCTTTCTCTTCTCTGTTCCTCTCTCGCTTGGCAGAACCATTGTAAATCTAAACAACCCCACCTCAAGCCCGCCCCGGAGGCAATCCCCGATCCTCTGGCTCATGGAGGCGGATTTGTTCCCGAAGAGGTTTCACCTTCTTCTGCATCAGAAAATTTGGACCGTACGCAATCTGAGGTCAACAACAAGAAGCAGAAGAAAAAGGCAGCACCAACTATATATTATGCTTCGAGAACACATTCACAAATTTCTCAAGTGATTCGTGAATTGCGGAAAACTGCATACAGGGTGCCTATGGCTGTGTTGGCATCACGGAAACATTACTGCACCAATACAAATATACTTGGCAAAGAGAATATTGATGAAGAATGCAAACAATTATTGAAAGATCAGGCAACCGGGTGTCCAGAATTCAAAAATGCACATAAAGTCAAAGGTCATCCCTCTCTTCAGAAAGGAGGATGCAATGAAGTGCATGACATAGAAGATCTTGTAAAAGTTGGACAAGTAGTGAAAGGTTGCTCTTATTATGCTGCTCGTTCTATGTCAGATGATGCAGAGTTGGTATTTTGTCCATATAGCTACATCATTAATCCAGTCATTCGGGCAGCAATGGACGTGGATATTAAAGGAGCTGTAGTGATTCTTGATGAAGCTCACAATATAGAGGACATTGCTCGTGATTCTGGCAGTGTGGATATTGAAGAGGATGTTTTGGATAAATTACAAATGGAGCTCCAGCAACTTTGTCCTATAAATGCCACAATTTACCGACCACTATATGAAATGGCGCAGGGCCTTACTAGTTGGATGGAAGAGAAGAAAAACATGCTAGAAAAGCGTGATTTTCAGCACTATGTATCGTGTTGGACTGGTGATAAAGCTTTAAGAGAGCTTGAAGAAGCAAATATTTCGAAACAGTGCTTCCCTATTTTGCTAGAATGTGCAACCAAGGCAATCAAAGTTGCTACAGACTTGGAGGCAGAAGCACCTCATTTAAGTGGCATGTCGGTGATAACACTAGAAGGTTTATTCTCATCACTAACATATTTCTTCTCAAGAAATGGTTCTCACATGTTGGACTACCAGCTTGCTCTTCAGCGCTATGTTAGAAAAGATACTGGAAGAGCTTTTGGAAATTGGACGTATGCTTTAAGTTTGTGGTGCTTGAATCCAGCAGTTGTGTTTAAAGATGTTGCTGATCTTTCTTTATCAATCATCTTGACTTCTGGGACACTGTCACCAATGACATCCTTTTCTTCTGAGCTTGGAGTTCATTTTGAAACTAGTCTTGAAGCTCCACATGTCATTGATGTTGACTCACAGGTGTGGCCTGCTATAATCTCCACTGGTCCTGGTAATTGTCCATTAAATGCAAGTTACAAAACAGCTGACGGATATGCATTCCAGGATGCAGTTGGAAAATCTTTAGAGGAAATCTTCAAGATTGTTCCAGGTCAATGGTCTCGATTAAATGCAGAAAAGTCCCTTTTTGTTGAACCAAGAGGAGGAAGCCAAGATGATTTTGAACTTGCATTAAAGGGGTATTATGATTCAATTCATCATGGCAAAAGACCTACATTGGGAAGGAGGCGAAGAATTAGGAAAATTGATCTGAATCATGTCCATGCAGTTGATTCACTACAGAATTCTAATAAAGAAGGAGCTGCTTTACTTGGTGTTTGTCGAGGAAAGGTTTCTGAAGGAATTGATTTCTCCGATGATAATGCCAGAGTAGTTATTATTGTTGGTATTCCATTTCCCAATATAAATGATATTCAAGTTGCACTAAAGAAGAAATATAATGACACATACAAATTATCCAAAAATCTTTTGAGTGGAAATGAATGGTACTGCCACCAAACATTTCGAGCTTTAAATCAAGCTGCAGGGCGCTGTATACGGCACAAACTTGATTATGGAGCAATCATTCTACTGGATGAACGTTTTCGGGAAGAAAGAAATAGAGCATTCTTTTCAAAGTGGCTAAGAAGACCATTGAGAGTGTATGACAGCTTTGATTTGTCATTGGTGGGACTAAAATCATTCTTTGAGGATGCCAAGGAACGTTATGGCATGAATAAAGTGCATGTCATGCAAAAATTGGGCTCAAATAGTGATGATGTCCCAGACAAGGATCAGAATATGAGGTTCACAAGGAAAAAAAAACATAAACAGAACAAGTCTGGTTGTGGAGATGGGAGAGAAACATCAGTGATTGAGAATAACATCTCTTTTCCCATTCTAACCTCTCAAGATCTTGGTGAGTGTCAGCCATCAGCCCAATGGAATAACAACACATACAATTGTAAAGCTCAACCAGAAGGCTGTAATCAGACAGAGCCAAGGTTCTCCGGGGAATCATTTGTGGCAATCAGACATGTTGGCAGTGATCCTGGTAGTCCTGATTGCTCCAAGTATGACAACTCTGGTTCTACCATAATTGAGTCCTTTGCTCAATTTCCAGATCACTTATCAAGTCTTCCAATGTCTTCAACCAATGGAAGTAAAAATTCTTCAAGGGCCCAGTCTTCAATAACAATAACTCCTGAAAAGAATGCAACAAATTATATACAAGAAATGGAATCATCTTTGAATTTAAGTGTCAATTCTCACAATCAGAAAAGGAGAAAACCCTTGGTCACACCATTTATAGACCTCACTGAAGAAGAAAATTATATTGCACCTTGTGCCAGTCCTCTTACACGGTACACAAAAAGCTCAGTGGATGTTAAAGAGATAACTCATGGATGTGAGAATGGTTTTGAGAGAACTTGGGATTCAAATTGTCCGTTACTGACCAGCAATATACCTATTTCATGTTCATTAACTGTTCCTCTACTGGACAAAAGGTTACAGATATTTTGTTCATTCTGCAAAAGTCCATTGGGCCGACCTGAGAACCATCTATATCTTACATGCTCGTTGATTACATCATCAAAAGCTCATTTAAGATCCCTTTTGAAACAGAGACTGAAAACTTATGCTACTGATACTTTAAAGAGCATACCAGTTATTATTACTGATCCTTCATTTGTTGATCAACGAATTTGTAATAGAACACCTAACAGTGAACCAGAACAAGGAATTTGGTGTCCAAAAGATGGGTGTGTCTTCAGCACTATTTTCTGTCCCTTCTGCAGTAATGCCAACAATTTGCTAGGAGTTCAGATCATGGCAACCAATTCATCAAATGTTCAGTTACTTAACAAGATATTGTTTTACTTTGATTCTTTGGAAGTGAAGAACCATGAGGAATCCGGGAATGAGACTTCAGGGGAAGTGGATCTGTTACCAGTTAATGACTCAGCTGTGGATGAAATTGCTGCCTTGAATTCCTTTGATAAATATTCTTATTTTCCCCAACCAGGGAATTCAAAAGTCTGGAAGACTAGAAAATCTAAGGTAAGAATTTAG 3603 0.3991 MVSATNPNPKNVYHIGGLQVEFPYQPYGSQFAFMGRVISTLNRAQREGHCHALLESPTGTGKSLSLLCSSLAWQNHCKSKQPHLKPAPEAIPDPLAHGGGFVPEEVSPSSASENLDRTQSEVNNKKQKKKAAPTIYYASRTHSQISQVIRELRKTAYRVPMAVLASRKHYCTNTNILGKENIDEECKQLLKDQATGCPEFKNAHKVKGHPSLQKGGCNEVHDIEDLVKVGQVVKGCSYYAARSMSDDAELVFCPYSYIINPVIRAAMDVDIKGAVVILDEAHNIEDIARDSGSVDIEEDVLDKLQMELQQLCPINATIYRPLYEMAQGLTSWMEEKKNMLEKRDFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAIKVATDLEAEAPHLSGMSVITLEGLFSSLTYFFSRNGSHMLDYQLALQRYVRKDTGRAFGNWTYALSLWCLNPAVVFKDVADLSLSIILTSGTLSPMTSFSSELGVHFETSLEAPHVIDVDSQVWPAIISTGPGNCPLNASYKTADGYAFQDAVGKSLEEIFKIVPGQWSRLNAEKSLFVEPRGGSQDDFELALKGYYDSIHHGKRPTLGRRRRIRKIDLNHVHAVDSLQNSNKEGAALLGVCRGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVALKKKYNDTYKLSKNLLSGNEWYCHQTFRALNQAAGRCIRHKLDYGAIILLDERFREERNRAFFSKWLRRPLRVYDSFDLSLVGLKSFFEDAKERYGMNKVHVMQKLGSNSDDVPDKDQNMRFTRKKKHKQNKSGCGDGRETSVIENNISFPILTSQDLGECQPSAQWNNNTYNCKAQPEGCNQTEPRFSGESFVAIRHVGSDPGSPDCSKYDNSGSTIIESFAQFPDHLSSLPMSSTNGSKNSSRAQSSITITPEKNATNYIQEMESSLNLSVNSHNQKRRKPLVTPFIDLTEEENYIAPCASPLTRYTKSSVDVKEITHGCENGFERTWDSNCPLLTSNIPISCSLTVPLLDKRLQIFCSFCKSPLGRPENHLYLTCSLITSSKAHLRSLLKQRLKTYATDTLKSIPVIITDPSFVDQRICNRTPNSEPEQGIWCPKDGCVFSTIFCPFCSNANNLLGVQIMATNSSNVQLLNKILFYFDSLEVKNHEESGNETSGEVDLLPVNDSAVDEIAALNSFDKYSYFPQPGNSKVWKTRKSKVRI* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0697 1200 Gene3D - 26 337 IPR027417 -
Apr9g0697 1200 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 8 1082 IPR045028 -
Apr9g0697 1200 SMART deadxpd 18 316 IPR006554 GO:0003678|GO:0016818
Apr9g0697 1200 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 16 351 IPR014013 GO:0005524
Apr9g0697 1200 Pfam DEAD_2 137 300 IPR010614 GO:0003677|GO:0003678|GO:0005524
Apr9g0697 1200 SMART Cxpdneu3 529 714 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Apr9g0697 1200 MobiDBLite consensus disorder prediction 888 910 - -
Apr9g0697 1200 ProSitePatterns Glutaredoxin active site. 1100 1116 IPR011767 -
Apr9g0697 1200 Pfam Helicase C-terminal domain 541 726 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Apr9g0697 1200 PANTHER FANCONI ANEMIA GROUP J PROTEIN 8 1082 - -
Apr9g0697 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 708 IPR027417 -
Apr9g0697 1200 MobiDBLite consensus disorder prediction 83 130 - -
Apr9g0697 1200 CDD SF2_C_XPD 503 712 - -
Apr9g0697 1200 Gene3D - 516 737 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0697 Apr-Chr9 11582957 11609234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0697 K15362 - gmx:100779610 1942.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0697 9 11582957 11609234 Apr9g0697 9 11582957 11609234 ECH