Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0680 ATGGACTCAGTCTTCCTCTTCTGCACCGGCGCGCTCCTCGTCGGCGGCCTCTACTGGTTTGTCTGCATTCTGGGCCCGGCAGAGCAAAAGGGCAAACGCGCCACGGCACTCTCCAGCGGCTCCATCTCGGCGGAGAAAGTCCAAGACAACTACAAACAGTACTGGTCTTTCTTCCGCCGCCCAAAGGAGATCGAAACCGCAGACAAAGTCCCGGACTTCGTGGACACGTTCTACAACCTCGTAACGGACATCTACGAGTGGGGCTGGGGACAATCCTTCCACTTCTCACCCTCGATCCCAGGGAAGTCACACCGCGAGGCGACGCGCATTCACGAAGAGATGGCGGCGGATCTCATCCAGGCCGAGCCGGGGCAGCGAATCCTGGACGTGGGCTGCGGGGTGGGCGGGCCCATGCGGTCGATCGCGGCCCACTCAGGTGCGAGCGTGGTGGGCATCACGATCAACGAGTACCAGGTGAAGCGGGCTCTGTCGCACAACAAGAAGGCGGGCCTGGATTCGATGTGCCAGGTGGTGTGTGGCAACTTCCTCCACATGCCCTTCCCCGACAACAGCTTCGACGCCGCGTATTCAATCGAGGCCACGTGTCACGCGCCGAAGCTTGACGAGGTGTACGCGGAGGTGTTTCGTGTGTTGAAGCCTGGGGCTTTGTACGTGTCGTACGAGTGGGTGACAACTGATAAGTACGGGGGGCAGAATGCGGAACACGTGGAGATTATTCAAGGCATTGAGAGAGGGGACGCTTTGCCTGGGCTGAGGAGTTACTCTGATATTGCTCAGACGGCGCGTAGGGTGGGGTTCCAGGTTGTGAGAGAGCGCGATCTGGCTCTTCCACCTGCACACCCTTGGTGGACCCGCTTGAAGATGGGTAGGATCGCCTACTGGCGGAACCACCTTCTCGTTTCTGCACTCGCCTCTTTGGGAATTGCGCCCAAAGGAACCGTCCATGTTCACGAAATGCTCGTTAAAACTGCTGACTTTTTGACCAAAGGGGGTGACACTGGAATATTCTCCCCCATGCACATGATCCTCTGCCGAAAACCTCTACCCTAG 1071 0.5854 MDSVFLFCTGALLVGGLYWFVCILGPAEQKGKRATALSSGSISAEKVQDNYKQYWSFFRRPKEIETADKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHREATRIHEEMAADLIQAEPGQRILDVGCGVGGPMRSIAAHSGASVVGITINEYQVKRALSHNKKAGLDSMCQVVCGNFLHMPFPDNSFDAAYSIEATCHAPKLDEVYAEVFRVLKPGALYVSYEWVTTDKYGGQNAEHVEIIQGIERGDALPGLRSYSDIAQTARRVGFQVVRERDLALPPAHPWWTRLKMGRIAYWRNHLLVSALASLGIAPKGTVHVHEMLVKTADFLTKGGDTGIFSPMHMILCRKPLP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0680 356 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Apr9g0680 356 CDD AdoMet_MTases 126 230 - -
Apr9g0680 356 PANTHER - 1 354 IPR044625 GO:0008168|GO:0032259
Apr9g0680 356 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Apr9g0680 356 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Apr9g0680 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Apr9g0680 356 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 354 - -
Apr9g0680 356 Gene3D Vaccinia Virus protein VP39 44 309 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0680 Apr-Chr9 11138900 11140466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0680 116 280 Acyl Lipid Metabolism Gene Families AT1G73600 27.879 6.23e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0680 K08242 - gmx:100804517 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0680 9 11138900 11140466 Apr9g0680 9 11138900 11140466 ECH