Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0646 ATGATAGCAGAGAGATTCGAGGACGAAGAGAAATGGCTCGCCGAAGGGATCGCCGGCATTCAGCACAACGCATTCTTCATGCATCGCGCCTTGGACGAAAACAATCTTAGAGACGCTCTCAAATTCTCCGCTCAGATGTTATCGGAGCTTCGAACTTCCAGGCTCTCACCGCACAAATATTATGAACTGTATATGAGAGCCTTCGACGAGCTCAAGAGGCTGGAGATTTTCTTCAAAGACGAAAGCAGACACGGCGTTTCCATAGTTGACCTATACGAGCTTGTTCAGCACGCTGGAAATATATTGCCTAGATTGTATCTTCTTTGCACGGTAGGATCTGTTTACCTCAGATGCAAGGATGCTCCTGTAAGGGAAGTTCTTAAAGATCTAGTGGAAATGTGTCGCGGCATTCAAAATCCGATTCGAGGTCTGTTTTTGAGGAGTTACCTTTCTCAAGTCAGTAAAGATAAGTTGCCTGATATCGGTTATGAATATGAAGAAGGGGAATCTAATGGTGTGATAGATGCAGTTGAATTTGTTCTACAGAATTTCACAGAGATGAATAAGCTTTGGGGACCCGGCCGGATACGAGAGAAGAAGGAAAAAGAAAGGAACGAGCTTCGCGATCTTGTAGGGAAGAATCTACACGTTCTGAGTCAGATAGAGGGTGTGGACCTTGACATGTACAAAGACACTGTCCTTCCAAATGTCTTAGAGCAGGTTGTCAACTGTAAAGATGAGCTTGCGCAATTTTACCTTATGGAGTGCATAATCCAGGTTTTTCCAGATGAGTACCATTTGCAGACACTTGAAACATTATTAGGTGCTTGCCCCCAATTGCAGCCTGCAGTAGACATCAAGACAGTGTTAGCTCAGTTAATGGACAGGTTGTCAAATTATGCTGCTTCAAGTACTGAAGTATTACCCGAATTTCTGCAAGTGGAAGCATTTACCAAATTAAGCACTGCAATTGGCAGGGTGATAGAAGCACAAGTTGACATGGCTATTGTGGGAGCAATAGCTTTGCATGTCTCTCTTCTTACATTTACTCTTCGTGTTCACCCAGATCGACTTGATTATGTGGACCAAGTTCTGGGATCGTGTGTCAAAAAACTTTCTGGAAAACCAAAGCTGGATGATAACAGGGCAACAAAGCAAGTTGTTGCACTTTTAAGTGCTCCGCTTGATAAATACAATGATATTGTGACTGCCCTGACACTTTCCAATTATCCTCGTGTAATGGATCACCTTGATAATGAAACAAATAAAGTCATGGCCATGGTTATTATCCAAAGCATTATGAAGAATAACACTTACATCTCTACTGCTGATAAGGTTGAAGTTTTATTTGAATTAATAAAAGGGCTTATAGTGGATTTGGATGGATCAAATGTGGATGAGGTTGATGAAGAAGATTTCAACGAGGAACAAAATTCTGTTGCTCGCCTCATACACATGCTTCATAATGATGACCCGGAGGAAATGTTTAAGATAATATGTACTGTAAAGAAGCATATTATGAGTGGTGGACCAAGGCGCCTACCTTTTACAGTTCCTTCCCTGATATTCTCTGCACTAAGGTTGATCAGGCAATTGCAAGGTCAGGATGGAGATGTCGTGGGAGAAGAAGTTCCTACAACACCTAAAAAAATATTTCAGCTTTTAAATGAGACCATTGAAGCACTTTCTTCTGTATCATCTCCTGAACTGGCCCTGAGACTGTATCTGCAATGTGCTGAGGCTGCTAATGACTGTGACCATGAGCCTGTTGCTTATGAATTTTTCACTCAGGCATTCGTATTATATGAAGAAGAAATTGCGGACTCTAAGGCCCAGGTAACTGCAATACATTTAATTATTGGGAGTCTTCAGAGAATGAATGTGTTTGGTGTTGAGAACAGGGATACATTAACACACAAGGCCACAGGGTATTCAGCAAAGCTTCTGAAGAAACCTGATAAGTGCCGAGCAGTTTATGCATGCTCTCATCTCTTTTGGGTTGATGATCAAGATGGTATTAAAGATGGAGAAAGGGTATTGCTTTGCCTTAAGCGTGCTTTGAGGATTGCAAATGCTGCCCAGGAAATGGCCAATGTAGCAAGGGGTAGCAGTGGTCCTGTAACCCTTTTTGTTGAAATACTGAACAAGTACATTTACTATTTTGAGAAAGGAAACCCACAGATCACTAGTGATACTATCCAGGGGCTTATAGAATTGATCACAACTGAGATGCAGAGTGACAATGCATCAGCTCTTCCAGTTTCAGATGCTTTCTTTGCCGGCACATTGAGGTACATCCAATTCCAAAAACAGAAGGGCGGTATACTGGGTGAAAAATATGACCCAATCAAGGTCTAA 2358 0.4194 MIAERFEDEEKWLAEGIAGIQHNAFFMHRALDENNLRDALKFSAQMLSELRTSRLSPHKYYELYMRAFDELKRLEIFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYLRCKDAPVREVLKDLVEMCRGIQNPIRGLFLRSYLSQVSKDKLPDIGYEYEEGESNGVIDAVEFVLQNFTEMNKLWGPGRIREKKEKERNELRDLVGKNLHVLSQIEGVDLDMYKDTVLPNVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGACPQLQPAVDIKTVLAQLMDRLSNYAASSTEVLPEFLQVEAFTKLSTAIGRVIEAQVDMAIVGAIALHVSLLTFTLRVHPDRLDYVDQVLGSCVKKLSGKPKLDDNRATKQVVALLSAPLDKYNDIVTALTLSNYPRVMDHLDNETNKVMAMVIIQSIMKNNTYISTADKVEVLFELIKGLIVDLDGSNVDEVDEEDFNEEQNSVARLIHMLHNDDPEEMFKIICTVKKHIMSGGPRRLPFTVPSLIFSALRLIRQLQGQDGDVVGEEVPTTPKKIFQLLNETIEALSSVSSPELALRLYLQCAEAANDCDHEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGSLQRMNVFGVENRDTLTHKATGYSAKLLKKPDKCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQEMANVARGSSGPVTLFVEILNKYIYYFEKGNPQITSDTIQGLIELITTEMQSDNASALPVSDAFFAGTLRYIQFQKQKGGILGEKYDPIKV* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0646 785 Gene3D - 461 770 IPR042491 -
Apr9g0646 785 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 785 - -
Apr9g0646 785 PIRSF Retromer_Vps35 3 785 IPR005378 GO:0015031|GO:0030906|GO:0042147
Apr9g0646 785 SUPERFAMILY ARM repeat 203 516 IPR016024 -
Apr9g0646 785 PANTHER VACUOLAR SORTING PROTEIN 35 2 785 IPR005378 GO:0015031|GO:0030906|GO:0042147
Apr9g0646 785 Pfam Vacuolar protein sorting-associated protein 35 12 742 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0646 Apr-Chr9 10496416 10505098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0646 K18468 - gmx:100778365 1444.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0646 9 10496416 10505098 Apr9g0646 9 10496416 10505098 ECH