Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0640 ATGAGGAAGTGGACGGTCGCTTCCGTTCTCCTTCTACTCTGTCTCCTCTCTCTCTTTGCAGATCAAGGTCGAAAGTTTCAGGCGAATGCCGAGGGAAATTCCGAAGAGCTTGTAGATCCACCTAAGGTGGAGGACAAGATCGGTGCTGTTCCTAATGGCCTTTCTACGGATTCAGATGTGGCCAAGAGGCTTTGGACAAGATTAGGTTCCTCTCCCTCACGGATAAGGAGGTTTTGGGTGAAGTTGATAACACCAAGCTTGAAATCCAGGTATGTATGGGAATCAAAAGCTGATGGAGCATTTGCAATTTCTGAAGATACCTGGAATGAACCACTTGGACGTGGAACTGAGATTAGATTACACCTCAAAGAAGAGGCTGGGGAGTATTTGGAGGAGTCTAAACTGAAGGAATTGGTCAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCAGCTGATGAAGATGATTCCAGTGATGAAGAGGACTCAAATGAAAGCACTAAGGAGGAAAATGAAGAAGAAGATACTGATAAAAGTGATGATGAAGAGAAAAAACCCAAGACAAAGACGGTGAAGGAAACAACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGTTGAGGAATCCAAAGGAGGTTACTGATGAAGAGTACACGAAATTCTACCACTCTCTTGCCAAGGACTTCAGTGATGAGAAACCTTTAGCATGGAGTCACTTTACTGCCGAAGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTGCCACATAAGGCACCTCATGATTTATATGAGAGTTATTATAACTCCAACAAATCCAACCTGAAGTTGTATGTTAGACGAGTGTTCATCTCGGATGAATTTGACGAACTGTTACCAAAGTATCTAAACTTTTTGAAGGGCCTTGTTGATTCTGACACGTTGCCACTTAATGTATCTCGAGAAATGCTTCAACAACATAATAGTCTAAAGACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGACATGATCCGTAGGATTGCTGATGAAGATCCTGATGAGGTGGCGGACAAAGAAAAGAAAGAAGAGACATCCTCTGACAATGATGAGAAGAGAGGCCAATATGCTAAGTTCTGGAATGAGTTTGGTAAGTCCATTAAACTAGGTATCATTGAGGATGCCACTAACAGAAATCGCTTGGCAAAACTGCTCAGATTTGAGAGCACCAAGTCTGAGGGTAAATTGACGTCTCTTGATCAGTACATATCTAGAATGAAATCGGGGCAGAAGGATATCTTTTACATTACTGGAACCAGCAAAGAACAACTGGAAAAATCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTATGAGGTTATTTTCTTCACAGATCCTGTTGATGAATACTTGATGCAATACCTAATGGATTATGAAGATAAGAAGTTCCAAAATGTGTCAAAGGAGGGTCTGAAACTTGGGAAGGATGCAAAAGACAAGGAATTGAAGGAATCCTTTAAGGATCTTACTAAGTGGTGGAAAAACGCCCTTTCCAATGACAATGTTGATGATGTGAAGATATCTAACCGATTGGATAACACTCCTTGTGTAGTGGTGACTTCAAAATATGGTTGGAGCGCTAACATGGAGAGAATCATGCAGTCTCAAACTTTGTCAGATGCTAGCAAGCAAGCATACATGCGTGGCAAGAGGGTTCTTGAGATCAATCCTAGGCACCCTATAATCAAGGAGCTCCGAGAGAGAGTAGTAAAGAATCCTGAGGATGAGAGTGTGAAACACACAGCTCAACTGATGTACCAGACTGCACTCTTCGAAAGTGGCTTCTTGCTTAACGACCCCAAGGATTTTGCTTCCCGTATTTATGATTCTGTGAAGTCTAGCTTAGACATCAGTCCTGAAGCAACAGTTGAAGAGGAAGATGAAACCGAAGTAGAGGCTGAAAGTGATGCAAAAGAAGATGCATCTACTTCAACGCCTGAAGATGATGCGGCAAATGATGATACTGATGTCAAGGACGAGTTGTAG 2064 0.4167 MRKWTVASVLLLLCLLSLFADQGRKFQANAEGNSEELVDPPKVEDKIGAVPNGLSTDSDVAKRLWTRLGSSPSRIRRFWVKLITPSLKSRYVWESKADGAFAISEDTWNEPLGRGTEIRLHLKEEAGEYLEESKLKELVKRYSEFINFPIYIWASKEVDVEVPADEDDSSDEEDSNESTKEENEEEDTDKSDDEEKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTDEEYTKFYHSLAKDFSDEKPLAWSHFTAEGDVEFKAVLFVPHKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHNSLKTIKKKLIRKALDMIRRIADEDPDEVADKEKKEETSSDNDEKRGQYAKFWNEFGKSIKLGIIEDATNRNRLAKLLRFESTKSEGKLTSLDQYISRMKSGQKDIFYITGTSKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDAKDKELKESFKDLTKWWKNALSNDNVDDVKISNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDESVKHTAQLMYQTALFESGFLLNDPKDFASRIYDSVKSSLDISPEATVEEEDETEVEAESDAKEDASTSTPEDDAANDDTDVKDEL* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0640 687 Pfam Hsp90 protein 128 666 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Apr9g0640 687 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 90 670 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Apr9g0640 687 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 82 243 IPR036890 -
Apr9g0640 687 Gene3D - 79 175 IPR036890 -
Apr9g0640 687 MobiDBLite consensus disorder prediction 162 202 - -
Apr9g0640 687 MobiDBLite consensus disorder prediction 646 661 - -
Apr9g0640 687 PRINTS 90kDa heat shock protein signature 114 131 IPR020575 -
Apr9g0640 687 PRINTS 90kDa heat shock protein signature 132 150 IPR020575 -
Apr9g0640 687 Gene3D - 502 648 IPR037196 -
Apr9g0640 687 Gene3D - 215 407 - -
Apr9g0640 687 Gene3D - 408 495 - -
Apr9g0640 687 PANTHER BNAA08G14800D PROTEIN 90 670 - -
Apr9g0640 687 SUPERFAMILY Ribosomal protein S5 domain 2-like 216 495 IPR020568 -
Apr9g0640 687 MobiDBLite consensus disorder prediction 640 687 - -
Apr9g0640 687 MobiDBLite consensus disorder prediction 672 687 - -
Apr9g0640 687 MobiDBLite consensus disorder prediction 162 191 - -
Apr9g0640 687 PIRSF HSP90_HTPG 79 681 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Apr9g0640 687 SUPERFAMILY HSP90 C-terminal domain 514 636 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0640 Apr-Chr9 10410247 10415224 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0640 K09487 - gmx:100779976 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0640 9 10410247 10415224 Apr9g0640 9 10410247 10415224 ECH