Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0638 ATGGATCTCGCAACACAATCATTATTATCATTCTTGTTAACACTTCATCTATCAGTATCAGGGGTAATTTCAACCACATTCACTCTGGTTAACAAATGTGACTACACAGTATGGCCAGGAATTCTTTCAAATGCGGGTGTCGCTCCTCTTTCAACCACCGGCTTCGTTCTTGAAACCGGCGAATCTAGCACCATCACCGCACCAACCTCTTGGGGTGGCCGCTTTTGGGGTCGAACCCTTTGCTCCCAAGACTCCACCGGAAAGTTCTCTTGCATCACCGGCGATTGTGGCTCCGGAAAGCTTGAATGCGCCGGAAACGGAGCTACGCCGCCAGCCACCTTAGCCGAGTTCACCTTAGATGGCGCGGGAGGCCTCGATTTCTTCGATGTCAGCTTGGTAGATGGCTACAACGTGCCCATGCTTGTGGTCCCGCAGGGTGGCTCTGGCAACAACTGCTCCGCCACAGGGTGCGTCGGGGATCTGAACGGCGCGTGTCCCTCCGAGCTTAAGGTGATGAGTGCTGATGGAAAAGAGGGCGTGGCGTGCAAGAGCGCGTGCGAGGCCTTCAATTCGCCACAGTATTGCTGCAGTGGTGCCTATGGCACACCTGACACTTGCAAGCCTTCTTCTTACTCACAGATATTCAAGAACGCTTGCCCACGCGCCTATAGCTACGCGTACGACGATAAGACCAGTACCTTTACATGTGCATCTGCGGATTATACTATCACCTTTTGCCCTTCCCCTACCACCAGTCAGAAGGCTTCACAGGGGCAAGATGGTTCTTCTTCTTCTGCCTCGCCAATGCTTAACAACGCCACAATGGTGTATGAAGGTGGTTTTGATCAAAGTGAAATATCAGGGGCCACGTGTACCCATGTGTTCCAATCCCGAGCTATTGCCGGCATTTTAGGTTTCACGATGGCTATTTGGTGGTTGTGCCAACTCTTCTAA 954 0.5199 MDLATQSLLSFLLTLHLSVSGVISTTFTLVNKCDYTVWPGILSNAGVAPLSTTGFVLETGESSTITAPTSWGGRFWGRTLCSQDSTGKFSCITGDCGSGKLECAGNGATPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMLVVPQGGSGNNCSATGCVGDLNGACPSELKVMSADGKEGVACKSACEAFNSPQYCCSGAYGTPDTCKPSSYSQIFKNACPRAYSYAYDDKTSTFTCASADYTITFCPSPTTSQKASQGQDGSSSSASPMLNNATMVYEGGFDQSEISGATCTHVFQSRAIAGILGFTMAIWWLCQLF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0638 317 PANTHER OS03G0233200 PROTEIN 10 273 IPR001938 -
Apr9g0638 317 SUPERFAMILY Osmotin, thaumatin-like protein 25 248 IPR037176 -
Apr9g0638 317 CDD TLP-PA 26 246 - -
Apr9g0638 317 PANTHER BNAA02G17480D PROTEIN 10 273 - -
Apr9g0638 317 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Apr9g0638 317 SMART tha2 27 247 IPR001938 -
Apr9g0638 317 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Apr9g0638 317 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Apr9g0638 317 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Apr9g0638 317 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Apr9g0638 317 Pfam Thaumatin family 31 247 IPR001938 -
Apr9g0638 317 PIRSF PR5 2 285 IPR001938 -
Apr9g0638 317 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Apr9g0638 317 Gene3D Thaumatin 25 247 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0638 Apr-Chr9 10393686 10396513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0638 9 267 Receptor kinase-like Gene Family AT5G38280 55.303 4.80e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0638 - - gmx:100787631 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0638 9 10393686 10396513 Apr9g0638 9 10393686 10396513 ECH