Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0540 ATGGGGAAGCATTCGCAGGCATGGTTGGCAATGAGGAAGAAGAGATGGCCGTTAATGCTAGTGGCACTCTTGTCCCTCTCCACCGTCACCGTTCTCTTCATACGAACCACTTCCGATTCGTGCAACGGTAACTCCCCGCCTCAGGCTCAGGCTCAGGCTCAGGTTCGGCATTTGGAAGAACCTCAGGCTCCGATTTGGTCATCGTCGCAACCAAATCCTCTTGAATTCATGAAGTCGAAGCTTGTTCTGATGGTTTCTCACGAGCTTTCTCTCTCCGGTGGACCTCTTTTGCTTATGGAATTGGCTTTTCTGTTACGCGCCGTTGGATCCGACGTCGTTTGGATCACTAATCAGAAACCTCCTCAACCCGACGAAATCATCTACAGTTTGGAGAACAAGATGTTGGACAGAGGAGTACAGGTGTTGCCTGCGAAAGGCGAAAGGGCTGTGGAAACGGCTCTAAAGGCTGATTTGGTAATTCTGAATACTGCTGTGGCCGGGAAGTGGCTTAATGCAGTTCTCAAGGAAAGAATTTCGGAGGTTCTTCCAAAGGTTTTGTGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAGTGGAATATGTTAAGCACCTCCCTTTTGTTGCAGGTGCAATGATCGATTCACATACGACTGCTGAATACTGGAAGAATAGGACTAGGGAGCGGTTAGGGATTAAAATGCCTCAAATTTATGTAGTGCATCTTGGGAATAGCAAGGAACTTATGGAAGTTGCAGAAGATAGTGTGGCAAAGAGAGTTCTTCGAGAGCATGTTCGGCAATCTCTTGGAGTGAGAAATGATGATCTACTCTTTGCCGTCATAAATAGTGTTTCACGTGGTAAAGGGCAGGATCTTTTTCTTCGGTCCTTTCATGAAAGTTTGCTCCTCATCCAGGAGAAGAAACTTCAGGTGCCATCTTTGCATGCTGTAGTTGTAGGGAGTGATATGAATGCTCAGACAAAGTTTGAAATGGAGTTACGTAAATTTGTGGCGGAGAAAAAAATCCAGGATCGTGTTCACTTTGTAAACAAAACCCTAGCGGTGGCTCCTTACCTGGCTTCTATTGATGTTCTTGTTCAGAATTCTCAGGCACGGGGAGAATGTTTTGGGAGGATAACCATTGAAGCAATGGCATTTCGCTTGCCTGTACTTGGAACTGCAGCTGGGGGCACCATGGAGATTGTGGTAAATAGGACAACTGGTTTGCTGCATCCCGTTGGAAAAGAAGGTGTGACACCTCTTGCAAATAACATTGTGAATTTGGCAACTCATGTTGAGAGGAGGCTGACTATGGGTAAGAAAGGATACGAGAGAGTGAAGGATAGGTTTCTGGAACCCCATATGGCACATAGAATCGCATTGGTTTTGAAGGAAGTGTTGCGGAAGGGTGGCCATAATTAA 1422 0.4606 MGKHSQAWLAMRKKRWPLMLVALLSLSTVTVLFIRTTSDSCNGNSPPQAQAQAQVRHLEEPQAPIWSSSQPNPLEFMKSKLVLMVSHELSLSGGPLLLMELAFLLRAVGSDVVWITNQKPPQPDEIIYSLENKMLDRGVQVLPAKGERAVETALKADLVILNTAVAGKWLNAVLKERISEVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKMPQIYVVHLGNSKELMEVAEDSVAKRVLREHVRQSLGVRNDDLLFAVINSVSRGKGQDLFLRSFHESLLLIQEKKLQVPSLHAVVVGSDMNAQTKFEMELRKFVAEKKIQDRVHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTMEIVVNRTTGLLHPVGKEGVTPLANNIVNLATHVERRLTMGKKGYERVKDRFLEPHMAHRIALVLKEVLRKGGHN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0540 473 Pfam Glycosyl-transferase family 4 78 257 IPR041693 -
Apr9g0540 473 Gene3D Glycogen Phosphorylase B; 251 450 - -
Apr9g0540 473 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 470 - -
Apr9g0540 473 Pfam Glycosyl transferases group 1 264 444 IPR001296 GO:0016757
Apr9g0540 473 PANTHER GLYCOSYLTRANSFERASE 1 470 - -
Apr9g0540 473 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 77 468 - -
Apr9g0540 473 CDD GT4_PimA-like 106 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0540 Apr-Chr9 7568408 7571751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0540 5 468 Glycosyltransferase AT1G19710 72.961 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0540 - - aprc:113847885 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0540 9 7568408 7571751 Apr9g0540 9 7568408 7571751 ECH