Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0506 ATGTCCATATCCATGTCACTGTCCTCAGTCCCTGCTCGTCTCACACTCCTCGCCCTCTTCTCCGCCACCACCTTCTATTGCATCTACAAATCTCGCCGCCTACGACACCTCAAATTCTCGCTCTACCCTAACACTAACACTAAACCTAACCCTAAACCGAAAATCCTTTTTCTCTCCGAAACCGGCACCTCCAAAGCCCTTGCTTGTCGCCTCCACCGTCTCCTCGCTTCAAACGACATCGCATTTGACCTCGTCGATTCGCAACACTACGAGCCCGAAGACCTCCCAAAAGAAACGCTCCTTCTCCTCATCGCTTCCACGTGGCAAGACGGAAAGCCTCCTTCGGCTTCTCGATTCTTCGTCACGTGGCTCGCCGACAGCGCCAACGACTTCCGAGCCGGCTCTTTGCTCCTCTCGCGCTGCAAGTTCGCCGTCTTCGGCGTCGGAAGCCGAGCCTATGGCGACTCATTCAACACCGTCGCCAGGGTTCTCGCGAAGCATATGAGGGCGCTTGGCGCCGCGGAGGTGCTTCCTCTGTGGGAAGGAGACGTTGACGGCGCTGACGTGGATGCCGTTTTTGATCTGTGGTGTGAGAAGGTGGTTGGGGTTTTGAAAGGTGGTGCTGTGGATAACGGCGGTGACGATGCCGGAGAATGTGGCGTTTCGAGTTCCGAAGAGGATTCTGATGTGGAGAGTGAGGTGGAATCGGAGATTGTTGATCTTGAGGACATTGCTGGTAAAGCTCCTTCGAGGAAGTCGGTGGCTACGGGTGAGGAAACTAATGGGAAATTGAATGGAACAAGAGAAATGGTGACTCCGGTGATTCGTGCGAATTTAGAGAAGCAGGGATATAAAATTATTGGTTCACATAGTGGTGTCAAGATTTGTAGATGGACCAAATCGCAGCTTCGAGGTCGGGGTGGTTGCTACAAGCATTCGTTCTATGGAATAGAGAGTCACAGGTGCATGGAGGCAACCCCTAGCTTGGCATGTGCAAATAAATGTGTTTTCTGTTGGAGGCATCACACAAATCCAGTAGGGAAAAGTTGGCAGTGGAAGATTGACGATCCAATAGAGATTGTAAATTCTGCAATAGACCTGCATACAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTTACCTTGGAGCGATTAACTGAAGGTCTCTCACCACGGCATTGTGCATTATCCCTTGTTGGTGAACCAATTATGTATCCAGAGATAAATTCACTTGTGGATGAACTGCACAAAAGGAGGATTTCTACTTTTTTAGTCACAAATGCGCAATTTCCAGAGAAAATTCAGTTGCTGAAGCCTGTTACTCAGTTATATGTCAGTGTAGATGCTGCAACAAAGGATTCTTTGAAGGCAATTGATAGACCACTCTTTGGAGATTTCTGGGAGCGATTCATTGGTTCCTTGACTTCTTTAAGAGATAAACACCAGCGAACTGTATACCGCCTGACCCTGGTGAAAGGTTGGAATACTGAAGATGTTGATGCTTATTCTAAGCTCTTCAGTTTAGGAGAACCTGACTTTGTTGAAATCAAGGGAGTTACATATTGTGGCTCGTCTGCTACATCAAAATTGACAATGGAAAATGTCCCTTGGCATACTGATGTGAAAGCTTTCTCAGAAGCTCTTGCTTTGAAAAGTCAAGGGGAGTACGAAGTTGCATGTGAGCATGCTCACTCGTGCTGCGTGCTTTTAGCAAAAACTAAGAAATTCAAAATTGATGGCAAGTGGTATACATGGATAGACTATGAAAAATTCCATGATCTGGTGGCATCTGGAAGAAATTTTGACAGCAGAGATTATATGACTGCCACACCATCCTGGGCCGTCTATGGATCAGAGGAAGGAGGATTTGATCCAGGACACTTGAGATATAGGAAAGAGAGACATCATAAGTCAAGCCGCCGCAATCAATCAGGATCAAATTGA 1947 0.4715 MSISMSLSSVPARLTLLALFSATTFYCIYKSRRLRHLKFSLYPNTNTKPNPKPKILFLSETGTSKALACRLHRLLASNDIAFDLVDSQHYEPEDLPKETLLLLIASTWQDGKPPSASRFFVTWLADSANDFRAGSLLLSRCKFAVFGVGSRAYGDSFNTVARVLAKHMRALGAAEVLPLWEGDVDGADVDAVFDLWCEKVVGVLKGGAVDNGGDDAGECGVSSSEEDSDVESEVESEIVDLEDIAGKAPSRKSVATGEETNGKLNGTREMVTPVIRANLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWKIDDPIEIVNSAIDLHTNMIKQMKGVPGVTLERLTEGLSPRHCALSLVGEPIMYPEINSLVDELHKRRISTFLVTNAQFPEKIQLLKPVTQLYVSVDAATKDSLKAIDRPLFGDFWERFIGSLTSLRDKHQRTVYRLTLVKGWNTEDVDAYSKLFSLGEPDFVEIKGVTYCGSSATSKLTMENVPWHTDVKAFSEALALKSQGEYEVACEHAHSCCVLLAKTKKFKIDGKWYTWIDYEKFHDLVASGRNFDSRDYMTATPSWAVYGSEEGGFDPGHLRYRKERHHKSSRRNQSGSN* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0506 648 Pfam Flavodoxin 55 195 IPR008254 GO:0010181
Apr9g0506 648 Gene3D - 30 209 IPR029039 -
Apr9g0506 648 Gene3D Aldolase class I 255 585 IPR013785 -
Apr9g0506 648 SUPERFAMILY Radical SAM enzymes 328 508 - -
Apr9g0506 648 SFLD tRNA wybutosine-synthesizing 267 577 - -
Apr9g0506 648 ProSiteProfiles Flavodoxin-like domain profile. 53 201 IPR008254 GO:0010181
Apr9g0506 648 Pfam Wyosine base formation 510 573 IPR013917 -
Apr9g0506 648 SFLD tRNA wybutosine-synthesizing 267 577 IPR034556 GO:0008033|GO:0051539
Apr9g0506 648 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 5 639 IPR034556 GO:0008033|GO:0051539
Apr9g0506 648 SUPERFAMILY Flavoproteins 51 204 IPR029039 -
Apr9g0506 648 ProSiteProfiles Radical SAM core domain profile. 315 558 IPR007197 GO:0003824|GO:0051536
Apr9g0506 648 CDD Radical_SAM 327 503 - -
Apr9g0506 648 PRINTS Flavodoxin signature 54 67 IPR001094 GO:0010181
Apr9g0506 648 PRINTS Flavodoxin signature 102 113 IPR001094 GO:0010181
Apr9g0506 648 PRINTS Flavodoxin signature 140 150 IPR001094 GO:0010181
Apr9g0506 648 PRINTS Flavodoxin signature 165 184 IPR001094 GO:0010181
Apr9g0506 648 Pfam Radical SAM superfamily 327 505 IPR007197 GO:0003824|GO:0051536
Apr9g0506 648 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 5 639 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0506 K15449 - gmx:100791920 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0506 9 7087361 7095439 Apr9g0506 9 7087361 7095439 ECH